added support for both version. unpinned

cgat-developers · Sep 20, 2023 · 64503d2 · 64503d2
1 parent f87829b
commit 64503d2
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diff --git a/cgatcore/database.py b/cgatcore/database.py
@@ -44,6 +44,8 @@ def executewait(dbhandle, statement, regex_error="locked",
     '''
     while 1:
         try:
+            cc = dbhandle.execute(statement)
+        except AttributeError:
             with dbhandle.begin() as conn:
                 cc = conn.execute(sqlalchemy.text(statement))
         except Exception as msg:

diff --git a/conda/environments/cgat-core.yml b/conda/environments/cgat-core.yml
@@ -17,7 +17,7 @@ dependencies:
 - ruffus
 - setuptools
 - six
-- sqlalchemy>=2.0
+- sqlalchemy
 # Misc dependencies
 - coreutils
 - nomkl