Skip to content
Test CWL Files With Singularity

Test CWL Files With Singularity #3

Sign in to view logs

Test CWL Files With Singularity

Test CWL Files With Singularity #3

Workflow file for this run

.github/workflows/singularity-test.yml at c63aa32
name: Test CWL Files With Singularity
on:
workflow_run:
workflows: [Build and Push Docker Image]
types: [completed]
branches:
- main
workflow_dispatch:
jobs:
list-tests:
runs-on: ubuntu-latest
steps:
- name: List Files
id: list-tests
uses: bwbioinfo/list-files-action@main
with:
test-file-directory: tests
inputs-file-extension: yml
test-file-extension: cwl
outputs:
list-matrix: ${{ steps.list-tests.outputs.tests-matrix }}
test-cwl-singularity:
needs: list-tests
strategy:
matrix:
tests: ${{ fromJson(needs.list-tests.outputs.list-matrix) }}
runs-on: ubuntu-latest
steps:
- name: Test Singularity
uses: bwbioinfo/singularity-cwl-action@main
with:
test-file: ${{ matrix.tests[0] }}
inputs-file: ${{ matrix.tests[1] }}