Add pkgdown site workflow

.Rbuildignore

@@ -1,40 +1,44 @@
-README.md
-\.Rinstignore
-vignettes/msm-manual-.+\.eps
-vignettes/msm-manual-.+\.pdf
-vignettes/msm-manual\.dvi
-vignettes/msm-manual\.tex
-vignettes/auto
-vignettes/.+\.aux
-vignettes/.+\.log
-vignettes/.+\.toc
-vignettes/.+\.bbl
-vignettes/.+\.blg
-inst/doc/msm-manual.Rnw
-Rplots\.ps
-tests/slow
-tests/test_slow.R
-\.gdb_history
-\.Rprofile
-\.Rhistory
-TAGS
-INDEX
-src/.+\.d
-src/.+\.o
-src/.+\.so
-src/.+\.dll
-src/.+\.rc
-src/.+\.a
-src/Makedeps
-\.sh
-^\._
-chm
-\.RData
-\.build.timestamp
-TODO
-_region_.tex
-src/doc
-^.*\.Rproj$
-^\.Rproj\.user$
-\.dropbox\.attr
-docs
+README.md
+\.Rinstignore
+vignettes/msm-manual-.+\.eps
+vignettes/msm-manual-.+\.pdf
+vignettes/msm-manual\.dvi
+vignettes/msm-manual\.tex
+vignettes/auto
+vignettes/.+\.aux
+vignettes/.+\.log
+vignettes/.+\.toc
+vignettes/.+\.bbl
+vignettes/.+\.blg
+inst/doc/msm-manual.Rnw
+Rplots\.ps
+tests/slow
+tests/test_slow.R
+\.gdb_history
+\.Rprofile
+\.Rhistory
+TAGS
+INDEX
+src/.+\.d
+src/.+\.o
+src/.+\.so
+src/.+\.dll
+src/.+\.rc
+src/.+\.a
+src/Makedeps
+\.sh
+^\._
+chm
+\.RData
+\.build.timestamp
+TODO
+_region_.tex
+src/doc
+^.*\.Rproj$
+^\.Rproj\.user$
+\.dropbox\.attr
+docs
+^_pkgdown\.yml$
+^docs$
+^pkgdown$
+^\.github$

.github/.gitignore

@@ -0,0 +1 @@
+*.html

.github/workflows/pkgdown.yaml

@@ -0,0 +1,48 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    branches: [main, master]
+  pull_request:
+    branches: [main, master]
+  release:
+    types: [published]
+  workflow_dispatch:
+
+name: pkgdown
+
+jobs:
+  pkgdown:
+    runs-on: ubuntu-latest
+    # Only restrict concurrency for non-PR jobs
+    concurrency:
+      group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
+    steps:
+      - uses: actions/checkout@v3
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::pkgdown, local::.
+          needs: website
+
+      - name: Build site
+        run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
+        shell: Rscript {0}
+
+      - name: Deploy to GitHub pages 🚀
+        if: github.event_name != 'pull_request'
+        uses: JamesIves/[email protected]
+        with:
+          clean: false
+          branch: gh-pages
+          folder: docs

.gitignore

@@ -1,15 +1,17 @@
-.Rproj.user
-.Rhistory
-.RData
-.Ruserdata
-src/*.o
-src/*.so
-src/*.dll
-.dropbox.attr
-*.Rproj
-symbols.rds
-*~
-vignettes/_region_.tex
-vignettes/auto
-R/#*
-inst/#*
+.Rproj.user
+.Rhistory
+.RData
+.Ruserdata
+src/*.o
+src/*.so
+src/*.dll
+.dropbox.attr
+*.Rproj
+symbols.rds
+*~
+vignettes/_region_.tex
+vignettes/auto
+R/#*
+inst/#*
+.Rprofile
+docs

DESCRIPTION

@@ -16,7 +16,8 @@ Imports:
     survival,mvtnorm,expm
 Suggests:
     mstate,minqa,doParallel,foreach,numDeriv,testthat,flexsurv
-URL: https://github.com/chjackson/msm
+URL: https://github.com/chjackson/msm,
+    https://chjackson.github.io/msm/
 BugReports: https://github.com/chjackson/msm/issues
 LazyData: yes
 Encoding: UTF-8

README.md

@@ -1,7 +1,7 @@
 msm
 ===
 
-The development repository for the [msm](http://cran.r-project.org/package=msm) R package for continuous-time multi-state modelling of panel data.
+The [msm](http://cran.r-project.org/package=msm) R package for continuous-time multi-state modelling of panel data.
 
 
 ## Installation (stable CRAN version)
@@ -21,10 +21,3 @@ devtools::install_github('chjackson/msm')
 [Multi-state modelling with msm: material from a web-based training course](https://chjackson.github.io/msm/msmcourse/)
 
 [User guide for the current CRAN version](https://cran.r-project.org/web/packages/msm/vignettes/msm-manual.pdf)
-
-
-
-
-### Note
-
-This is the current repository, hosting versions from 1.6.4 onwards.  Previous development versions were hosted on [r-forge](https://r-forge.r-project.org/projects/msm/). 

_pkgdown.yml

@@ -0,0 +1,4 @@
+url: https://chjackson.github.io/msm/
+template:
+  bootstrap: 5
+