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@chop-dbhi

DBHi

Department of Biomedical and Health Informatics

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  1. prometheus-sql prometheus-sql Public

    Service that exposes Prometheus metrics for a SQL result set.

    Go 203 55

  2. sql-agent sql-agent Public

    HTTP interface for executing ad-hoc SQL queries.

    Go 93 23

  3. dataexpress dataexpress Public

    [NOT MAINTAINED] DataExpress is a simple, Scala-based cross database ETL toolkit supporting Postgres, MySql, Oracle, SQLServer, and Sqlite

    Scala 72 9

  4. dicom-anon dicom-anon Public

    Python DICOM Anonymizer

    Python 66 22

  5. avocado avocado Public archive

    Metadata APIs for Django

    Python 41 10

  6. origins origins Public

    Origins is an open source bi-temporal database for storing and retrieving facts for slowly-changing data. It support "time travel" queries and has built-in change detection.

    Go 39 5

Repositories

Showing 10 of 164 repositories
  • data-models Public

    Collection of various biomedical data models in parseable formats.

    chop-dbhi/data-models’s past year of commit activity
    28 8 17 (2 issues need help) 0 Updated Oct 24, 2024
  • sql-agent Public

    HTTP interface for executing ad-hoc SQL queries.

    chop-dbhi/sql-agent’s past year of commit activity
    Go 93 BSD-2-Clause 23 9 (3 issues need help) 0 Updated Jul 5, 2023
  • data-models-sqlalchemy Public

    SQLAlchemy models and DDL and ERD generation from chop-dbhi/data-models style JSON endpoints.

    chop-dbhi/data-models-sqlalchemy’s past year of commit activity
    Python 11 3 7 1 Updated May 22, 2023
  • infomodels Public Forked from infomodels/infomodels

    One CLI to rule them all.

    chop-dbhi/infomodels’s past year of commit activity
    Go 0 2 0 0 Updated May 17, 2023
  • GGIR Public Forked from wadpac/GGIR

    Code corresponding to R package GGIR

    chop-dbhi/GGIR’s past year of commit activity
    R 0 LGPL-3.0 62 0 0 Updated May 9, 2023
  • vscode-multiline-string-editor Public

    Edit multiline strings that need to be encoded as single-line strings (for example, JSON strings that contain literal `\n` characters) in Visual Studio Code.

    chop-dbhi/vscode-multiline-string-editor’s past year of commit activity
    TypeScript 5 3 2 2 Updated Apr 1, 2023
  • ehb-datasources Public

    datasource drivers, e.g. REDCap and Nautilus, that can be plugged into the Biorepository Portal

    chop-dbhi/ehb-datasources’s past year of commit activity
    Python 2 BSD-2-Clause 2 21 (1 issue needs help) 0 Updated Mar 31, 2023
  • icebrrrg Public
    chop-dbhi/icebrrrg’s past year of commit activity
    R 0 0 0 0 Updated Mar 28, 2023
  • prometheus-sql Public

    Service that exposes Prometheus metrics for a SQL result set.

    chop-dbhi/prometheus-sql’s past year of commit activity
    Go 203 BSD-2-Clause 55 7 8 Updated Mar 6, 2023
  • brpv2 Public Forked from r3m0chop/biorepo-portal
    chop-dbhi/brpv2’s past year of commit activity
    JavaScript 0 BSD-2-Clause 6 0 0 Updated Mar 6, 2023
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