Releases: clingen-data-model/clinvar-ingest
Releases · clingen-data-model/clinvar-ingest
v2_1_0
What's Changed
- Add pipeline_version match in processing_history_pairs join by @theferrit32 in #264
- Add interp_explanation and test by @theferrit32 in #267
- Refactor processing history, and call stored procedures workflow by @toneillbroad in #268
- Allow bq-ingester to either read parsed_files as being a JSON column … by @theferrit32 in #269
Full Changelog: v2_0_5_alpha...v2_1_0
v2_0_5_alpha: Add classification content field
What's Changed
- Issue 260 classification content by @theferrit32 in #261
Full Changelog: v2_0_4_alpha...v2_0_5_alpha
v2_0_4_alpha
v2_0_3_alpha: Add missing vcv_id field to variation_archive table
- bugfix: a3dec58 Add missing vcv_id field to variation_archive table
Full Changelog: v2_0_2_alpha...v2_0_3_alpha
v2_0_2_alpha: Add dataset and schema version metadata to history table
What's Changed
- Add fields to final processing_history records during bq-ingester run by @theferrit32 in #253
Full Changelog: v2_0_1_alpha...v2_0_2_alpha
v2_0_1_alpha: Making v2 (new/classification) VCV XML the main pipeline
What's Changed
- Close #243 scv interpretation null bug by @theferrit32 in #244
- Override CLINVAR_INGEST_BQ_META_DATASET in github action test pipelin… by @theferrit32 in #245
- Run the lint script from ci action instead of re-specifying check commands by @theferrit32 in #247
- Replace isort, black, pylint with ruff by @theferrit32 in #246
- Update cloud run configs and dataset names and comments by @theferrit32 in #249
Full Changelog: v2_0_0_alpha...v2_0_1_alpha
v2_0_0_alpha: Model and table schema updates for new ClinVar XML
Update deploy-job github action to add clinvar-vcv-ingest-new (#240) * Update deploy-job github action to add clinvar-vcv-ingest-new * Add test run back in for vcv-ingest-new
v1_0_0
What's Changed
- Update pylint ruff by @theferrit32 in #215
- adding rcv_mapping.trait_set_content by @toneillbroad in #223
Full Changelog: v1_1_0_beta6...v1_0_0
v1_1_0_beta6
What's Changed
- Add a bq_ingest_processing flag to processing_history to stop multipl… by @toneillbroad in #213
Full Changelog: v1_1_0_beta5...v1_1_0_beta6
v1_1_0_beta5
What's Changed
- Add processing history by @theferrit32 in #208
- Update processing_history_table by @toneillbroad in #209
- Processing history refactoring and joining rcv-vcv pairs by @theferrit32 in #210
- Minor deployment change for new release by @toneillbroad in #211
Full Changelog: v1_1_0_beta4...v1_1_0_beta5