Revert "fixing quantile sorting problems, adding epidatasets" #333
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
# | |
# Modifications: | |
# * workflow_dispatch added to allow manual triggering of the workflow | |
# * trigger branches changed | |
# * API key secrets.SECRET_EPIPREDICT_GHACTIONS_DELPHI_EPIDATA_KEY | |
on: | |
push: | |
branches: [main, dev] | |
release: | |
types: [published] | |
workflow_dispatch: | |
name: pkgdown | |
jobs: | |
pkgdown: | |
# only build docs on the main repository and not forks | |
if: github.repository_owner == 'cmu-delphi' | |
runs-on: ubuntu-latest | |
# Only restrict concurrency for non-PR jobs | |
concurrency: | |
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
DELPHI_EPIDATA_KEY: ${{ secrets.SECRET_EPIPREDICT_GHACTIONS_DELPHI_EPIDATA_KEY }} | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::pkgdown, local::., any::cli | |
needs: website | |
- name: Build site | |
# - target_ref gets the ref from a different variable, depending on the event | |
# - override allows us to set the pkgdown mode and version_label | |
# - mode: release is the standard build mode, devel places the site in /dev | |
# - version_label: 'light' and 'success' are CSS labels for Bootswatch: Cosmo | |
# https://bootswatch.com/cosmo/ | |
# - we use pkgdown:::build_github_pages to build the site because of an issue in pkgdown | |
# https://github.com/r-lib/pkgdown/issues/2257 | |
run: | | |
target_ref <- "${{ github.event_name == 'pull_request' && github.base_ref || github.ref }}" | |
override <- if (target_ref == "main" || target_ref == "refs/heads/main") { | |
list(development = list(mode = "release", version_label = "light")) | |
} else if (target_ref == "dev" || target_ref == "refs/heads/dev") { | |
list(development = list(mode = "devel", version_label = "success")) | |
} else { | |
stop("Unexpected target_ref: ", target_ref) | |
} | |
pkg <- pkgdown::as_pkgdown(".", override = override) | |
cli::cli_rule("Cleaning files from old site...") | |
pkgdown::clean_site(pkg) | |
pkgdown::build_site(pkg, preview = FALSE, install = FALSE, new_process = FALSE) | |
pkgdown:::build_github_pages(pkg) | |
shell: Rscript {0} | |
- name: Deploy to GitHub pages 🚀 | |
if: github.event_name != 'pull_request' | |
uses: JamesIves/[email protected] | |
with: | |
clean: false | |
branch: gh-pages | |
folder: docs |