Singularity.prokka

Bootstrap: docker
From: continuumio/miniconda3:latest


%post
    apt-get update && apt-get -y upgrade
    apt-get install -y procps
    /opt/conda/bin/conda install -c bioconda perl-bioperl
    /opt/conda/bin/conda install -c conda-forge -c bioconda prokka

%labels
    Maintainer m-bull
    Version prokka-latest