- Luxembourg - Madrid - Barcelona
- https://www.linkedin.com/in/elisagdelope/
- @elisagdelope
Highlights
- Pro
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mkbaybe Public
Forked from emdgroup/baybeBayesian Optimization and Design of Experiments
Python Apache License 2.0 UpdatedOct 25, 2024 -
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deepchem Public
Forked from deepchem/deepchemDemocratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
Python MIT License UpdatedAug 24, 2024 -
GRL_sample_similarity_PD Public
Graph representation learning modelling pipeline exploiting sample-similarity networks derived from high-throughput omics profiles to learn PD-specific fingerprints in an end-to-end fashion. It is …
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scGPT_knockout_embeddings Public
Analyze the effect of gene knockouts on single-cell gene expression data using pre-trained foundation models. Compare embeddings before and after knockout and classify the samples.
Jupyter Notebook UpdatedJul 30, 2024 -
ESM2-bindingsites Public
Protein language model for binding site prediction
Jupyter Notebook UpdatedMay 27, 2024 -
funOmics Public
Aggregates or summarizes omics data into higher level functional representations such as GO terms gene sets or KEGG metabolic pathways, facilitating the analysis of functional molecular sets that a…
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Graph representation learning modelling pipeline exploiting molecular interaction networks derived from high-throughput omics profiles to learn PD-specific fingerprints in an end-to-end fashion. It…
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ML_PD_metab_transc Public
ML models for Parkinson's disease case-control classification using blood-based transcriptomics and metabolomics measurements at the baseline clinical visit along with dynamic features engineered f…
Jupyter Notebook MIT License UpdatedJan 17, 2024 -
ML_UPDRSIII_metab_transc Public
ML models to predict motor ability scores (UPDRS III) in Parkinson's disease using blood-based transcriptomics and metabolomics profiles. Leveraging baseline and temporal features engineered from s…
Jupyter Notebook MIT License UpdatedJan 17, 2024 -
NestedCV Public
Package and environment with the NestedCV() class - a scikit-learn compatible class for nested cross-validation.
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Statistical analyses for cross-sectional and longitudinal profiling of Parkinson's disease patients and controls transcriptomics and metabolomics from the PPMI cohort and the LuxPARK cohort respect…
R MIT License UpdatedJan 16, 2024 -
tuning_playbook Public
Forked from google-research/tuning_playbookA playbook for systematically maximizing the performance of deep learning models.
Other UpdatedJan 25, 2023 -
MScT-drug-screening-public Public
Some of the scripts developed in Pharmacelera S.L. for my Master Thesis (Parametrization of atom-types LogP-based hydrophobic descriptors for virtual screening). The project was developed within th…
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Python-Pandas-and-Plotly Public
Jupyter notebooks for learning and having an overview of Pandas library and Plotly with some exercises
Jupyter Notebook UpdatedDec 27, 2022 -
Datathon-Critical-Care Public
Datatathon Critical Care Tarragona 2018
Jupyter Notebook UpdatedDec 27, 2022 -
Deep learning specialization on coursera consists on a series of 5 courses: Neural Networks and deep learning / Improving Deep Neural Networks: Hyperparameter tuning, Regularization and Optimizatio…
Jupyter Notebook UpdatedDec 27, 2022 -
data_wrangling_R_tidyverse Public
Basics of data wrangling in R with the 'tidyverse'
UpdatedDec 27, 2022 -
CS224W Stanford 2019fall -- Machine Learning with Graphs.
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stable-diffusion Public
Forked from CompVis/stable-diffusionJupyter Notebook Other UpdatedSep 2, 2022 -
pytorch-tutorials Public
Forked from pytorch/tutorialsPyTorch tutorials.
Python BSD 3-Clause "New" or "Revised" License UpdatedAug 16, 2022 -
hist_cancer_detection Public
Histopathological cancer detection from kaggle competition
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Dialysis-predictions Public
Spin off the datathon Tarragona 2018 challenge
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Repo containing SAS papers and scripts hopefully useful for SAS beginners
SAS UpdatedNov 7, 2018