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.travis.yml
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#----------------------------------------------------------------
# Travis-CI configuration for Bioconductor packages
#
# REFERENCES:
# * Travis CI: https://travis-ci.org/
# * tutorial: https://docs.travis-ci.com/user/languages/r
# * see also: https://blog.rstudio.org/2016/03/09/r-on-travis-ci/
# * covr: https://github.com/jimhester/covr
# * Coveralls: https://coveralls.io/
#
# Validate your .travis.yml file at http://lint.travis-ci.org/
#----------------------------------------------------------------
language: r
cache: packages
# Temporarily enable when caching Bioconductor packages
#script: true
# R versions to be tested on
r:
# - bioc-release
- bioc-devel
# External dependencies
#addons:
# apt:
# packages:
# - gsl-bin
# - libgsl-dev
## Turn this to true before submission to CRAN/Bioconductor
warnings_are_errors: false
# r_build_args: "--no-build-vignettes"
# r_check_args: "--no-vignettes"
notifications:
email:
on_success: change
on_failure: change
## Use patched devtools
r_github_packages:
# - drisso/zinbwave
# - Bioconductor/DelayedArray
# - Bioconductor/HDF5Array
## Code coverage
#r_packages:
# - covr
## BiocCheck
bioc_packages:
- BiocCheck
after_success:
# - Rscript -e 'covr::coveralls(quiet=FALSE)'
- R CMD BiocCheck .