Add methods for the /api/v0/files/ endpoints

missioncontrol_client/__init__.py

@@ -1,9 +1,41 @@
 import argparse
+import datetime
+import io
 import json
 import os
+import socket
+import zlib
 from urllib.parse import urljoin
+from uuid import uuid4
 
+import pytz
 import requests
+from datalake import GzippingFile
+
+
+class UTC(object):
+    # TODO factor this out into a proper library
+
+    def __init__(self, d="now"):
+        if d == "now":
+            self._d = datetime.datetime.utcnow()
+        elif isinstance(d, datetime.datetime):
+            if not d.tzinfo:
+                # naive, assume UTC
+                d = d.replace(tzinfo=pytz.utc)
+            elif d.tzinfo == pytz.utc:
+                pass
+            else:
+                d = d.astimezone(pytz.utc)
+            self._d = d
+        else:
+            # TODO convert strings, etc
+            raise NotImplementedError()
+
+    @property
+    def iso(self):
+        d = self._d.isoformat('T', 'microseconds')
+        return d.replace("+00:00", "Z")
 
 
 class MCAPI(object):
@@ -13,6 +45,17 @@ def __init__(self, mc_base, jwt=None):
         self.s = requests.session()
         self.jwt = None
 
+    @classmethod
+    def from_environ(cls, ignore_ssl=False):
+        mc_api = cls(os.environ['MC_BASE'])
+        if ignore_ssl:
+            mc_api.s.verify = False
+        if os.environ.get('MC_JWT'):
+            mc_api.login(jwt=os.environ['MC_JWT'])
+        else:
+            mc_api.login(username=os.environ['MC_USERNAME'], password=os.environ['MC_PASSWORD'])
+        return mc_api
+
     def get(self, path, *args, **kwargs):
         r = self.s.get(urljoin(self.mc_base, path), *args, **kwargs)
         r.raise_for_status()
@@ -22,6 +65,16 @@ def getj(self, path, *args, **kwargs):
         r = self.get(path, *args, **kwargs)
         return r.json()
 
+    def post(self, path, *args, **kwargs):
+        r = self.s.post(urljoin(self.mc_base, path), *args, **kwargs)
+        r.raise_for_status()
+        return r
+
+    def postj(self, path, *args, **kwargs):
+        ret = self.s.post(urljoin(self.mc_base, path), *args, **kwargs)
+        ret.raise_for_status()
+        return ret.json()
+
     def put(self, path, *args, **kwargs):
         r = self.s.put(urljoin(self.mc_base, path), *args, **kwargs)
         r.raise_for_status()
@@ -145,6 +198,94 @@ def get_pass_task_stack(self, uuid, **kwargs):
             json=kwargs
         )
 
+    def get_latest_file(self, what, where, **kwargs):
+        return self.getj(
+            f'/api/v0/files/latest/{what}/{where}/',
+            params=kwargs
+        )
+
+    def get_files(self, what, **kwargs):
+        kwargs.update({"what": what})
+        return self.getj(
+            f'/api/v0/files/search/',
+            params=kwargs
+        )
+
+    def get_files_by_cid(self, cid, **kwargs):
+        return self.getj(
+            f'/api/v0/files/cid/{cid}/',
+            params=kwargs
+        )
+
+    def get_files_by_work_id(self, work_id, **kwargs):
+        return self.getj(
+            f'/api/v0/files/work-id/{work_id}/',
+            params=kwargs
+        )
+
+    def get_file(self, uuid):
+        return self.getj(
+            f'/api/v0/files/{uuid}/'
+        )
+
+    def download_file(self, uuid):
+        return self.get(
+            f'/api/v0/files/{uuid}/data/'
+        )
+
+    def download_cid(self, cid):
+        return self.get(
+            f'/api/v0/raw-file/{cid}/data/'
+        )
+
+    def upload_file(self, path, what, uuid=None, where=None, start=None,
+                    end=None, work_id=None, content_type=None):
+
+        if uuid is None:
+            uuid = str(uuid4())
+
+        if start is None:
+            start = UTC("now").iso
+        else:
+            start = UTC(start).iso
+
+        if where is None:
+            where = socket.getfqdn()
+
+        f = GzippingFile.from_filename(
+            path,
+            what=what,
+            where=where,
+            start=start,
+            work_id=work_id
+        )
+
+        # get signed upload
+        signed = self.postj(
+            f'/api/v0/files/presign/',
+            json=f.metadata
+        )
+
+        file_tuple = ("file", f)
+        if content_type is not None:
+            file_tuple += (content_type,)
+
+        # upload file
+        if "url" in signed:
+            signed["fields"]["Content-Encoding"] = "gzip"
+            resp = requests.post(
+                signed["url"],
+                data=signed["fields"],
+                files=[file_tuple]
+            )
+            resp.raise_for_status()
+
+        # upload metadata
+        return self.putj(
+            f'/api/v0/files/{uuid}/',
+            json=f.metadata
+        )
+
     def login(self, username=None, password=None, jwt=None):
         if username is not None and jwt is not None:
             raise ValueError("Can't give both a username and a jwt")
@@ -213,6 +354,7 @@ def handle_default_args(args):
         args.mc_api.login(username=args.username, password=args.password)
 
 def from_environ(ignore_ssl=False):
+    # deprecated, use MCAPI.from_environ()
     mc_api = MCAPI(os.environ['MC_BASE'])
     if ignore_ssl:
         mc_api.s.verify = False
@@ -221,4 +363,4 @@ def from_environ(ignore_ssl=False):
     else:
         mc_api.login(username=os.environ['MC_USERNAME'], password=os.environ['MC_PASSWORD'])
 
-    return mc_api
+    return mc_api