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Update Python dependencies
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by running `make update-dependencies`.
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@galaxybot @github-actions
galaxybot authored and github-actions[bot] committed Jul 6, 2024
1 parent 723e796 commit d0975ca
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Showing 4 changed files with 17 additions and 17 deletions.
10 changes: 5 additions & 5 deletions lib/galaxy/dependencies/dev-requirements.txt
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Expand Up @@ -16,7 +16,7 @@ boto3==1.34.131 ; python_version >= "3.8" and python_version < "3.13"
botocore==1.34.131 ; python_version >= "3.8" and python_version < "3.13"
build==1.2.1 ; python_version >= "3.8" and python_version < "3.13"
cachecontrol[filecache]==0.14.0 ; python_version >= "3.8" and python_version < "3.13"
certifi==2024.6.2 ; python_version >= "3.8" and python_version < "3.13"
certifi==2024.7.4 ; python_version >= "3.8" and python_version < "3.13"
cffi==1.16.0 ; python_version >= "3.8" and python_version < "3.13"
charset-normalizer==3.3.2 ; python_version >= "3.8" and python_version < "3.13"
click==8.1.7 ; python_version >= "3.8" and python_version < "3.13"
Expand All @@ -38,7 +38,7 @@ dogpile-cache==1.2.2 ; python_version >= "3.9" and python_version < "3.13"
exceptiongroup==1.2.1 ; python_version >= "3.8" and python_version < "3.11"
filelock==3.15.4 ; python_version >= "3.8" and python_version < "3.13"
fluent-logger==0.11.1 ; python_version >= "3.8" and python_version < "3.13"
fonttools==4.53.0 ; python_version >= "3.8" and python_version < "3.13"
fonttools==4.53.1 ; python_version >= "3.8" and python_version < "3.13"
frozenlist==1.4.1 ; python_version >= "3.8" and python_version < "3.13"
galaxy-release-util==0.1.11 ; python_version >= "3.8" and python_version < "3.13"
graylint==1.1.1 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -69,7 +69,7 @@ markdown-it-py==3.0.0 ; python_version >= "3.8" and python_version < "3.13"
markdown-it-reporter==0.0.2 ; python_version >= "3.8" and python_version < "3.13"
markupsafe==2.1.5 ; python_version >= "3.8" and python_version < "3.13"
matplotlib==3.7.5 ; python_version >= "3.8" and python_version < "3.9"
matplotlib==3.9.0 ; python_version >= "3.9" and python_version < "3.13"
matplotlib==3.9.1 ; python_version >= "3.9" and python_version < "3.13"
mdit-py-plugins==0.4.1 ; python_version >= "3.8" and python_version < "3.13"
mdurl==0.1.2 ; python_version >= "3.8" and python_version < "3.13"
mirakuru==2.5.2 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -117,7 +117,7 @@ pytest-mock==3.14.0 ; python_version >= "3.8" and python_version < "3.13"
pytest-playwright==0.5.1 ; python_version >= "3.8" and python_version < "3.13"
pytest-postgresql==6.0.0 ; python_version >= "3.8" and python_version < "3.13"
pytest-shard==0.1.2 ; python_version >= "3.8" and python_version < "3.13"
pytest==7.4.4 ; python_version >= "3.8" and python_version < "3.13"
pytest==8.2.2 ; python_version >= "3.8" and python_version < "3.13"
python-dateutil==2.9.0.post0 ; python_version >= "3.8" and python_version < "3.13"
python-irodsclient==2.0.1 ; python_version >= "3.8" and python_version < "3.13"
python-slugify==8.0.4 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -167,7 +167,7 @@ tinydb==4.8.0 ; python_version >= "3.8" and python_version < "3.13"
toml==0.10.2 ; python_version >= "3.8" and python_version < "3.13"
tomli==2.0.1 ; python_version >= "3.8" and python_full_version <= "3.11.0a6"
trio-websocket==0.11.1 ; python_version >= "3.8" and python_version < "3.13"
trio==0.25.1 ; python_version >= "3.8" and python_version < "3.13"
trio==0.26.0 ; python_version >= "3.8" and python_version < "3.13"
tuspy==1.0.3 ; python_version >= "3.8" and python_version < "3.13"
twill==3.2.5 ; python_version >= "3.8" and python_version < "3.13"
twine==5.1.1 ; python_version >= "3.8" and python_version < "3.13"
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2 changes: 1 addition & 1 deletion lib/galaxy/dependencies/pinned-lint-requirements.txt
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Expand Up @@ -4,4 +4,4 @@ flake8-bugbear==24.4.26
mccabe==0.7.0
pycodestyle==2.12.0
pyflakes==3.2.0
ruff==0.5.0
ruff==0.5.1
10 changes: 5 additions & 5 deletions lib/galaxy/dependencies/pinned-requirements.txt
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Expand Up @@ -37,7 +37,7 @@ botocore==1.34.131 ; python_version >= "3.8" and python_version < "3.13"
bx-python==0.12.0 ; python_version >= "3.8" and python_version < "3.13"
cachecontrol[filecache]==0.14.0 ; python_version >= "3.8" and python_version < "3.13"
celery==5.4.0 ; python_version >= "3.8" and python_version < "3.13"
certifi==2024.6.2 ; python_version >= "3.8" and python_version < "3.13"
certifi==2024.7.4 ; python_version >= "3.8" and python_version < "3.13"
cffi==1.16.0 ; python_version >= "3.8" and python_version < "3.13"
charset-normalizer==3.3.2 ; python_version >= "3.8" and python_version < "3.13"
cheetah3==3.2.6.post1 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -132,10 +132,10 @@ psutil==6.0.0 ; python_version >= "3.8" and python_version < "3.13"
pulsar-galaxy-lib==0.15.6 ; python_version >= "3.8" and python_version < "3.13"
pycparser==2.22 ; python_version >= "3.8" and python_version < "3.13"
pycryptodome==3.20.0 ; python_version >= "3.8" and python_version < "3.13"
pydantic-core==2.20.0 ; python_version >= "3.8" and python_version < "3.13"
pydantic-core==2.20.1 ; python_version >= "3.8" and python_version < "3.13"
pydantic-tes==0.1.5 ; python_version >= "3.8" and python_version < "3.13"
pydantic==2.8.0 ; python_version >= "3.8" and python_version < "3.13"
pydantic[email]==2.8.0 ; python_version >= "3.8" and python_version < "3.13"
pydantic==2.8.2 ; python_version >= "3.8" and python_version < "3.13"
pydantic[email]==2.8.2 ; python_version >= "3.8" and python_version < "3.13"
pydot==2.0.0 ; python_version >= "3.8" and python_version < "3.13"
pyeventsystem==0.1.0 ; python_version >= "3.8" and python_version < "3.13"
pyfaidx==0.8.1.1 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -188,7 +188,7 @@ starlette-graphene3==0.6.0 ; python_version >= "3.8" and python_version < "3.13"
starlette==0.37.2 ; python_version >= "3.8" and python_version < "3.13"
supervisor==4.2.5 ; python_version >= "3.8" and python_version < "3.13"
svgwrite==1.4.3 ; python_version >= "3.8" and python_version < "3.13"
tenacity==8.4.2 ; python_version >= "3.8" and python_version < "3.13"
tenacity==8.5.0 ; python_version >= "3.8" and python_version < "3.13"
tifffile==2023.7.10 ; python_version >= "3.8" and python_version < "3.13"
tinydb==4.8.0 ; python_version >= "3.8" and python_version < "3.13"
tomli==2.0.1 ; python_version >= "3.8" and python_version < "3.11"
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12 changes: 6 additions & 6 deletions lib/galaxy/dependencies/pinned-typecheck-requirements.txt
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@@ -1,24 +1,24 @@
--extra-index-url https://wheels.galaxyproject.org/simple

annotated-types==0.7.0 ; python_version >= "3.8" and python_version < "3.13"
boto3-stubs[s3]==1.34.138 ; python_version >= "3.8" and python_version < "3.13"
botocore-stubs==1.34.138 ; python_version >= "3.8" and python_version < "3.13"
boto3-stubs[s3]==1.34.140 ; python_version >= "3.8" and python_version < "3.13"
botocore-stubs==1.34.140 ; python_version >= "3.8" and python_version < "3.13"
cffi==1.16.0 ; python_version >= "3.8" and python_version < "3.13" and platform_python_implementation != "PyPy"
cryptography==42.0.8 ; python_version >= "3.8" and python_version < "3.13"
lxml-stubs==0.5.1 ; python_version >= "3.8" and python_version < "3.13"
mypy-boto3-s3==1.34.138 ; python_version >= "3.8" and python_version < "3.13"
mypy-extensions==1.0.0 ; python_version >= "3.8" and python_version < "3.13"
mypy==1.10.1 ; python_version >= "3.8" and python_version < "3.13"
pycparser==2.22 ; python_version >= "3.8" and python_version < "3.13" and platform_python_implementation != "PyPy"
pydantic-core==2.20.0 ; python_version >= "3.8" and python_version < "3.13"
pydantic==2.8.0 ; python_version >= "3.8" and python_version < "3.13"
pydantic-core==2.20.1 ; python_version >= "3.8" and python_version < "3.13"
pydantic==2.8.2 ; python_version >= "3.8" and python_version < "3.13"
tomli==2.0.1 ; python_version >= "3.8" and python_version < "3.11"
types-awscrt==0.20.12 ; python_version >= "3.8" and python_version < "3.13"
types-awscrt==0.21.0 ; python_version >= "3.8" and python_version < "3.13"
types-bleach==6.1.0.20240331 ; python_version >= "3.8" and python_version < "3.13"
types-boto==2.49.18.20240205 ; python_version >= "3.8" and python_version < "3.13"
types-contextvars==2.4.7.3 ; python_version >= "3.8" and python_version < "3.13"
types-dataclasses==0.6.6 ; python_version >= "3.8" and python_version < "3.13"
types-docutils==0.21.0.20240423 ; python_version >= "3.8" and python_version < "3.13"
types-docutils==0.21.0.20240704 ; python_version >= "3.8" and python_version < "3.13"
types-html5lib==1.1.11.20240228 ; python_version >= "3.8" and python_version < "3.13"
types-markdown==3.6.0.20240316 ; python_version >= "3.8" and python_version < "3.13"
types-paramiko==3.4.0.20240423 ; python_version >= "3.8" and python_version < "3.13"
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