Millions of small molecules will be downloaded from the ZINC database in 3D SDF file format, serving for docking based virtual screening purposes.
Option 1: Click on the badge and select Run all to excute the notebook on Google Colab (Coloab account needed)
https://aistudio.baidu.com/aistudio/projectdetail/6202460?contributionType=1
After loading the environment, double click the ipynb file to proceed.
A word of warning to Binder users, you should download the result in time since the virtual environment is termperary.
Updated on 16/06/2023
https://github.com/RyanZR/labodock/blob/main/notebooks/virtual_screening.ipynb