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Open-Sourced. Millions of small molecules will be downloaded from the ZINC database in 3D SDF file format, with one click, to get ready for a large scale virtual screening for certain protein target.

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Zinc-Million

Millions of small molecules will be downloaded from the ZINC database in 3D SDF file format, serving for docking based virtual screening purposes.

Option 1: Click on the badge and select Run all to excute the notebook on Google Colab (Coloab account needed)

Open In Colab

Option 2: you can try this on AI Studio (Baidu) 百度AiStudio (Baidu account needed)

https://aistudio.baidu.com/aistudio/projectdetail/6202460?contributionType=1

Option 3: Use on Binder, you don't have to register anything.

After loading the environment, double click the ipynb file to proceed.

Binder

A word of warning to Binder users, you should download the result in time since the virtual environment is termperary.

Updated on 16/06/2023

https://github.com/RyanZR/labodock/blob/main/notebooks/virtual_screening.ipynb

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Open-Sourced. Millions of small molecules will be downloaded from the ZINC database in 3D SDF file format, with one click, to get ready for a large scale virtual screening for certain protein target.

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  • Jupyter Notebook 100.0%