Code

Feature/synced collections#484

Code

Merged

vyasr merged 55 commits intomasterglotzerlab/signac:masterfrom feature/synced_collectionsglotzerlab/signac:feature/synced_collectionsCopy head branch name to clipboardFeb 20, 2021

+7,051-284

Commits

Commits on Jul 31, 2020

• Improve Sync Data Structures (#336)

  Show description for 7605b6b
  vishav1771

  authored
  7605b6b

Commits on Aug 20, 2020

• Add alternative backends for synced_collection (#364)

  Show description for 1906db8
  vishav1771

  authored
  1906db8

Commits on Sep 9, 2020

• Added validation layer to SyncedCollection (#378)

  Show description for ee015af
  vishav1771

  authored
  ee015af

Commits on Dec 22, 2020

• Added buffering to SyncedCollection (#363)

  Show description for feca409
  vishav1771

  authored
  feca409

• Feature/synced collection/reorg (#437)

  Show description for 6d7388c
  vyasr

  authored
  6d7388c

• Feature/synced collection/reorg tests (#438)

  Show description for f8b3cd2
  vyasr

  authored
  f8b3cd2

• Fix incomplete merge

  vyasr

  committed
  d1abf8f

• Remove lingering old file.

  vyasr

  committed
  e7118a6

Commits on Dec 25, 2020

• Feature/synced collection/cleanup (#445)

  Show description for df54278
  vyasr

  authored
  df54278

Commits on Dec 26, 2020

• Merge master, apply all relevant formatting tools, and add documentation (#446)

  Show description for 71d5941
  vyasr

  authored
  71d5941

Commits on Dec 27, 2020

• Feature/synced collection/cleanup2 (#447)

  Show description for d11d05d
  vyasr

  authored
  d11d05d

Commits on Jan 3, 2021

• Feature/synced collection/optimization (#453)

  Show description for 4e08121
  vyasr

  authored
  4e08121

• Remove unnecessary backend str from tests.

  vyasr

  committed
  0b2bbcf

Commits on Jan 5, 2021

• Feature/synced collection/test mongodb redis (#464)

  Show description for 260583f
  vyasr

  authored
  260583f

Commits on Jan 6, 2021

• Make SyncedCollections thread-safe (#463)

  Show description for ac93f37
  vyasr

  authored
  ac93f37

• Implements an in-memory buffer for SyncedCollections (#462)

  Show description for af991e7
  vyasr

  authored
  af991e7

• Clean up miscellaneous outstanding to-do items (#466)

  Show description for 25c68c1
  vyasr

  authored
  25c68c1

Commits on Jan 10, 2021

• Make buffering thread safe (#468)

  Show description for d5a9f57
  vyasr

  authored
  d5a9f57

• Feature/synced collection/unify buffering (#469)

  Show description for 8c72b08
  vyasr

  authored
  8c72b08

Commits on Jan 12, 2021

• Feature/synced collection/contexts (#470)

  Show description for 81aaef3
  vyasr

  authored
  81aaef3

• Merge remote-tracking branch 'origin/master' into feature/synced_collections

  vyasr

  committed
  63bc9fd

Commits on Jan 13, 2021

• Install pymongo on pypy.

  vyasr

  committed
  f4fb0c6

Commits on Jan 18, 2021

• Don't sync on construction.

  vyasr

  committed
  8fda448

Commits on Jan 19, 2021

• Add comparison operators to SyncedList and make sure modifying the filename of JSONDict is safe.

  vyasr

  committed
  b289b5f

• Remove unnecessary constructor validation, providing both data and resource arguments (e.g. filename for a JSONDict) is valid.

  vyasr

  committed
  fab18cb

Commits on Jan 20, 2021

• Merge remote-tracking branch 'origin/master' into feature/synced_collections

  bdice

  committed
  57c6ef9

• Fix unused imports.

  bdice

  committed
  0f876d5

Commits on Jan 25, 2021

• Feature/synced collection/replace jsondict (#472)

  Show description for f77e17c
  

  vyasr

  and

  bdice

  authored
  f77e17c

• Merge remote-tracking branch 'origin/master' into feature/synced_collections

  vyasr

  committed
  472722c

• Fix synced collection support for 0d numpy arrays.

  vyasr

  committed
  7a408ab

• Add oldest supported version of pymongo and ensure that zarr/mongo collections don't fail on import.

  vyasr

  committed
  8608412

• Deprecate json module (#480)

  Show description for d89ff95
  vyasr

  authored
  d89ff95

Commits on Jan 26, 2021

• Feature/synced collection/reorg (#481)

  Show description for dd3c565
  vyasr

  authored
  dd3c565

• Feature/synced collection/simplify global buffering (#482)

  Show description for 5ccda3f
  vyasr

  authored
  5ccda3f

Commits on Jan 27, 2021

• Feature/synced collection/deprecate old (#483)

  Show description for d280549
  vyasr

  authored
  d280549

Commits on Jan 28, 2021

• Feature/synced collection/fix buffer reload (#486)

  Show description for 0f90092
  vyasr

  authored
  0f90092

Commits on Jan 29, 2021

• Fix lots of documentation issues.

  vyasr

  committed
  23915b5

• Address first round of PR comments.

  vyasr

  committed
  0744d1e

• Update changelog.

  vyasr

  committed
  b63be11

• Fix mypy error.

  vyasr

  committed
  505b0e9

• Merge branch 'master' into feature/synced_collections

  vyasr

  authored
  5613ddc

• Don't error check uid unless it's provided.

  vyasr

  committed
  73dd05f

Commits on Feb 12, 2021

• First pass to address PR comments.

  vyasr

  committed
  c070ad5

Commits on Feb 17, 2021

• Feature/synced collection/remove attr access (#504)

  Show description for 9bb8887
  vyasr

  authored
  9bb8887

Commits on Feb 18, 2021

• Feature/synced collection/numpy (#503)

  Show description for d487007
  vyasr

  authored
  d487007

• Merge remote-tracking branch 'origin/master' into feature/synced_collections

  vyasr

  committed
  9f24fa7

Commits on Feb 19, 2021

• Remove add_validators and specify validators in class definition (#507)

  Show description for adddcb8
  vyasr

  authored
  adddcb8

• Don't use os.path.join where not needed. (#511)

  Show description for e71942d
  

  vyasr

  and

  bdice

  authored
  e71942d

• Disable recursive validation during recursive conversion of nested types. (#509)

  vyasr

  authored
  48863c4

• Feature/synced collection/optimize jsondict validation (#508)

  Show description for f0537c4
  vyasr

  authored
  f0537c4

• Feature/synced collection/optimize protected key lookup (#510)

  Show description for 28cfe46
  vyasr

  authored
  28cfe46

Commits on Feb 20, 2021

• Defer statepoint instantiation, unify reset_statepoint logic (#497)

  Show description for e5b8057
  bdice

  authored
  e5b8057

• Feature/synced collection/optimize (#513)

  Show description for 9259316
  vyasr

  authored
  9259316

• Optionally skip validation in SyncedCollection _update. (#512)

  Show description for ca3397c
  bdice

  authored
  ca3397c

• Merge remote-tracking branch 'origin/master' into feature/synced_collections

  vyasr

  committed
  9a73e9a