Skip to content

Retrieve all the INSDC public assemblies under a BioProject umbrella

License

Notifications You must be signed in to change notification settings

guigolab/bioproject-genome-tracker

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

97 Commits
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

bioproject-genome-tracker

Retrieve all the INSDC assemblies under the Earth Biogenome Project umbrella

It uses a scheduled github action to install the NCBI datasets CLI and pull the data from there.

Variables as the BioProject accession number are inject via a .env file

Assemblies are stored in a tsv file

About

Retrieve all the INSDC public assemblies under a BioProject umbrella

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published