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Merge branch 'main' of github.com:hbc/Platform
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lpantano committed Aug 22, 2024
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Expand Up @@ -27,7 +27,7 @@ This set up needs [bcbioR](https://github.com/bcbio/bcbioR) and [usethis](https:

Make sure the version is `0.1.3` with this command `packageVersion("bcbioR")` or re-install with `devtools::install_github("bcbio/bcbioR",build_manual = TRUE, build_vignettes = TRUE)`, if you are in your own environment

* Activate your R session to make your working directory to be your project folder: `usethis::proj_activate("/path/to/analysis/folder")`
* Create an R Project located in your project folder: `usethis::proj_activate("/path/to/analysis/folder")`
* Deploy folders/files compatible with any project: `bcbioR::bcbio_templates(type="base", outpath="/path/to/analysis/folder")`
* Start a git repository: `usethis::use_git()`

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