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Merge pull request #85 from hddm-devs/rlssm_dev
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readme update
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krishnbera authored May 21, 2022
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:Mailing list: https://groups.google.com/group/hddm-users/
:Copyright: This document has been placed in the public domain.
:License: HDDM is released under the BSD 2 license.
:Version: 0.9.5
:Version: 0.9.6

.. image:: https://secure.travis-ci.org/hddm-devs/hddm.png?branch=master

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HDDM now includes use of `likelihood approximation networks`_ in conjunction with reinforcement learning models via the **HDDMnnRL** class.
This allows researchers to study not only the across-trial dynamics of learning but the within-trial dynamics of choice processes, using a single model.
This module greatly extends the previous functionality for fitting RL+DDM models (via HDDMrl class) by allowing fitting of a number of variants of sequential sampling models in conjuction with a learning process (RL+SSM models).

We have included a new **simulator**, which allows data generation for a host of variants of sequential sampling models
in conjunction with the Rescorla-Wagner update rule on a 2-armed bandit task environment.
We have included a new **simulator**, which allows data generation for a host of variants of sequential sampling models in conjunction with the Rescorla-Wagner update rule on a 2-armed bandit task environment.
There are some new, out-of-the-box **plots** and **utility function** in the **hddm.plotting** and **hddm.utils** modules, respectively, to facilitate posterior visualization and posterior predictive checks.
Lastly you can also save and load **HDDMnnRL** models.
Please see the **documentation** (under **HDDMnnRL Extension**) for illustrations on how to use the new features.
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How to cite
===========

If HDDM was used in your research, please cite the publication_:
If HDDM was used in your research, please cite the `publication`__:

Wiecki TV, Sofer I and Frank MJ (2013). HDDM: Hierarchical Bayesian estimation of the Drift-Diffusion Model in Python.
Front. Neuroinform. 7:14. doi: 10.3389/fninf.2013.00014

If you use the HDDMnn, HDDMnnRegressor, HDDMnnStimCoding or HDDMnnRL class, please cite the publication2_:
If you use the HDDMnn, HDDMnnRegressor, HDDMnnStimCoding or HDDMnnRL class, please cite the `publication`__:

Alexander Fengler, Lakshmi N Govindarajan, Tony Chen, Michael J Frank (2021). Likelihood approximation networks (LANs) for fast inference of simulation models in cognitive neuroscience.
eLife 10:e65074. doi: 10.7554/eLife.65074
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.. _mailing list: https://groups.google.com/group/hddm-users/
.. _SciPy Superpack: http://fonnesbeck.github.com/ScipySuperpack/
.. _Anaconda: http://docs.continuum.io/anaconda/install.html
.. _publication: http://www.frontiersin.org/Journal/10.3389/fninf.2013.00014/abstract
.. _publication2: https://elifesciences.org/articles/65074
.. __: http://www.frontiersin.org/Journal/10.3389/fninf.2013.00014/abstract
.. __: https://elifesciences.org/articles/65074
.. _published papers: https://scholar.google.com/scholar?oi=bibs&hl=en&cites=17737314623978403194
.. _thread: https://groups.google.com/forum/#!topic/hddm-users/bdQXewfUzLs

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