Convert #13
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Convert | |
on: | |
workflow_dispatch: | |
inputs: | |
xlsFile: | |
description: 'XLS file with test data' | |
required: true | |
jobs: | |
LoadNewCSV: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
- run: | | |
cd /tmp &&\ | |
wget https://github.com/hl7au/au-fhir-test-data-utils/releases/latest/download/xls-converter.zip &&\ | |
unzip xls-converter.zip &&\ | |
pip install xls_converter* &&\ | |
rm -rf xls_converter* xls-converter.zip | |
- run: python -m xls_converter.main ${{ github.event.inputs.xlsFile }} testdata-csv | |
- name: Install .net deps | |
uses: awalsh128/cache-apt-pkgs-action@latest | |
with: | |
packages: | |
libicu-dev | |
unzip | |
execute_install_scripts: true | |
- run: | | |
cd /tmp &&\ | |
wget https://github.com/hl7au/au-fhir-test-data-utils/releases/latest/download/Csv2FhirMapping-linux-x64.zip &&\ | |
unzip Csv2FhirMapping-linux-x64.zip &&\ | |
chmod +x Csv2FhirMapping-linux-x64-binaries/Csv2Fhir | |
- run: | | |
cd Sparked.Csv2FhirMapping/ && | |
declare resources=(\ | |
"Patient" \ | |
"Organization" \ | |
"Location" \ | |
"Practitioner" \ | |
"PractitionerRole" \ | |
"Encounter" \ | |
"AllergyIntolerance" \ | |
"Condition" \ | |
"Immunization" \ | |
"Observation" \ | |
"Procedure" \ | |
"Medication" \ | |
"MedicationRequest") &&\ | |
for resource in $resources | |
do | |
echo $resource | |
done | |
#- name: Create Pull Request | |
# uses: peter-evans/create-pull-request@v6 | |
# with: | |
# token: ${{ secrets.GITHUB_TOKEN }} | |
# delete-branch: true | |
# commit-message: Update test data | |
# title: Update test data | |
# body: New updates from ${{ github.event.inputs.xlsFile }} | |
# labels: automated-pr | |
# base: master |