Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update to EDFlib v1.24 #230

Draft
wants to merge 4 commits into
base: master
Choose a base branch
from
Draft

Update to EDFlib v1.24 #230

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
5a6bb0a
Update to EDFlib v1.24
DimitriPapadopoulos Jun 27, 2023
fd98563
Increase resolution when writing annotations
DimitriPapadopoulos Jul 2, 2023
1819992
Change gender → sex
DimitriPapadopoulos Jul 2, 2023
1ed1022
Apply local patch to EDFlib v1.24
DimitriPapadopoulos Jul 3, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
16 changes: 8 additions & 8 deletions pyedflib/_extensions/_pyedflib.pyx
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@

__doc__ = """Cython wrapper for low-level C edflib implementation."""
__all__ = ['lib_version', 'CyEdfReader', 'set_patientcode', 'set_starttime_subsecond',
'write_annotation_latin1', 'write_annotation_utf8', 'set_technician', 'EdfAnnotation',
'write_annotation_latin1_hr', 'write_annotation_utf8_hr', 'set_technician', 'EdfAnnotation',
'get_annotation', 'read_int_samples', 'blockwrite_digital_samples', 'blockwrite_physical_samples',
'set_recording_additional', 'write_physical_samples' ,'set_patientname', 'set_physical_minimum',
'read_physical_samples', 'close_file', 'set_physical_maximum', 'open_file_writeonly',
Expand Down Expand Up @@ -277,7 +277,7 @@ cdef class CyEdfReader:
property gender:
def __get__(self):
warnings.warn("Variable 'gender' is deprecated, use 'sex' instead.", DeprecationWarning, stacklevel=2)
return self.hdr.gender
return self.hdr.sex

property birthdate:
def __get__(self):
Expand Down Expand Up @@ -436,11 +436,11 @@ def set_patientcode(int handle, char *patientcode):
# check if rw?
return c_edf.edf_set_patientcode(handle, patientcode)

cpdef int write_annotation_latin1(int handle, long long onset, long long duration, char *description):
return c_edf.edfwrite_annotation_latin1(handle, onset, duration, description)
cpdef int write_annotation_latin1_hr(int handle, long long onset, long long duration, char *description):
return c_edf.edfwrite_annotation_latin1_hr(handle, onset, duration, description)

cpdef int write_annotation_utf8(int handle, long long onset, long long duration, char *description):
return c_edf.edfwrite_annotation_utf8(handle, onset, duration, description)
cpdef int write_annotation_utf8_hr(int handle, long long onset, long long duration, char *description):
return c_edf.edfwrite_annotation_utf8_hr(handle, onset, duration, description)

cpdef int set_technician(int handle, char *technician):
return c_edf.edf_set_technician(handle, technician)
Expand Down Expand Up @@ -598,11 +598,11 @@ def rewind(handle, edfsignal):
def set_sex(handle, sex):
"""int edf_set_sex(int handle, int sex)"""
if sex is None: return 0 #don't set sex at all to prevent default 'F'
return c_edf.edf_set_gender(handle, sex)
return c_edf.edf_set_sex(handle, sex)

def set_gender(handle, gender):
warnings.warn("Function 'set_gender' is deprecated, use 'set_sex' instead.", DeprecationWarning, stacklevel=2)
return set_sex(handle, gender)
return c_edf.edf_set_sex(handle, gender)

def set_physical_dimension(handle, edfsignal, phys_dim):
"""int edf_set_physical_dimension(int handle, int edfsignal, const char *phys_dim)"""
Expand Down
Loading