build(deps): bump pypa/cibuildwheel from 2.19.2 to 2.20.0 #1636

Workflow file for this run

	# Name cannot contain commas because of setup-emsdk job
	name: Build and test

	on: [push, pull_request]
	env:
	CIBW_ENVIRONMENT_PASS_LINUX: PYTEST_TIMEOUT
	CIBW_TEST_COMMAND: "cd {project} && pip install --prefer-binary '.[test]' && python -m pytest -v tests"
	CIBW_SKIP: "cp36-* cp37-* pp37-*"
	PYTEST_TIMEOUT: 60
	MACOSX_DEPLOYMENT_TARGET: "10.9"

	jobs:
	build_wheel_linux:
	name: Build wheels on Linux (${{ matrix.wheel_arch }})
	runs-on: ubuntu-20.04
	strategy:
	fail-fast: false
	matrix:
	wheel_arch: [x86_64, i686]

	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	fetch-depth: 0

	- uses: actions/setup-python@v5
	name: Install Python
	with:
	python-version: '3.8'

	- name: Build wheels (manylinux)
	uses: pypa/[email protected]
	env:
	CIBW_BEFORE_BUILD: "yum install -y flex bison libxml2-devel zlib-devel cairo-devel && pip install -U cmake pip setuptools wheel && python setup.py build_c_core"
	CIBW_BUILD: "*-manylinux_${{ matrix.wheel_arch }}"
	# Skip tests for Python 3.10 onwards because SciPy does not have
	# 32-bit wheels for Linux. Also skip tests for Python 3.13 because
	# SciPy does not have wheels for Python 3.13 at all right now.
	CIBW_TEST_SKIP: "cp310-manylinux_i686 cp311-manylinux_i686 cp312-manylinux_i686 cp313-manylinux_*"

	- name: Build wheels (musllinux)
	uses: pypa/[email protected]
	env:
	CIBW_BEFORE_BUILD: "apk add flex bison libxml2-dev zlib-dev cairo-dev && pip install -U cmake pip setuptools wheel && python setup.py build_c_core"
	CIBW_BUILD: "*-musllinux_${{ matrix.wheel_arch }}"
	CIBW_TEST_COMMAND: "cd {project} && pip install --prefer-binary '.[test-musl]' && python -m pytest -v tests"

	- uses: actions/upload-artifact@v4
	with:
	name: wheels-linux-${{ matrix.wheel_arch }}
	path: ./wheelhouse/*.whl

	build_wheel_linux_aarch64_manylinux:
	name: Build wheels on Linux (aarch64/manylinux)
	runs-on: ubuntu-20.04
	if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	fetch-depth: 0

	- name: Set up QEMU
	id: qemu
	uses: docker/setup-qemu-action@v3

	- name: Build wheels (manylinux)
	uses: pypa/[email protected]
	env:
	CIBW_BEFORE_BUILD: "yum install -y flex bison libxml2-devel zlib-devel cairo-devel && pip install -U cmake pip setuptools wheel && python setup.py build_c_core"
	CIBW_ARCHS_LINUX: aarch64
	CIBW_BUILD: "*-manylinux_aarch64"

	- uses: actions/upload-artifact@v4
	with:
	name: wheels-linux-aarch64-manylinux
	path: ./wheelhouse/*.whl

	build_wheel_linux_aarch64_musllinux:
	name: Build wheels on Linux (aarch64/musllinux)
	runs-on: ubuntu-20.04
	if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	fetch-depth: 0

	- name: Set up QEMU
	id: qemu
	uses: docker/setup-qemu-action@v3

	- name: Build wheels (musllinux)
	uses: pypa/[email protected]
	env:
	CIBW_BEFORE_BUILD: "apk add flex bison libxml2-dev zlib-dev cairo-dev && pip install -U cmake pip setuptools wheel && python setup.py build_c_core"
	CIBW_ARCHS_LINUX: aarch64
	CIBW_BUILD: "*-musllinux_aarch64"
	CIBW_TEST_COMMAND: "cd {project} && pip install --prefer-binary '.[test-musl]' && python -m pytest -v tests"

	- uses: actions/upload-artifact@v4
	with:
	name: wheels-linux-aarch64-musllinux
	path: ./wheelhouse/*.whl

	build_wheel_macos:
	name: Build wheels on macOS (${{ matrix.wheel_arch }})
	runs-on: macos-latest
	env:
	LLVM_VERSION: "14.0.5"
	strategy:
	matrix:
	include:
	- cmake_arch: x86_64
	wheel_arch: x86_64
	- cmake_arch: arm64
	cmake_extra_args: -DF2C_EXTERNAL_ARITH_HEADER=../../../etc/arith_apple_m1.h -DIEEE754_DOUBLE_ENDIANNESS_MATCHES=ON
	wheel_arch: arm64

	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	fetch-depth: 0

	- name: Cache installed C core
	id: cache-c-core
	uses: actions/cache@v4
	with:
	path: vendor/install
	key: C-core-cache-${{ runner.os }}-${{ matrix.cmake_arch }}-llvm${{ env.LLVM_VERSION }}-${{ hashFiles('.git/modules/**/HEAD') }}

	- name: Cache C core dependencies
	id: cache-c-deps
	uses: actions/cache@v4
	with:
	path: ~/local
	key: deps-cache-v2-${{ runner.os }}-${{ matrix.cmake_arch }}-llvm${{ env.LLVM_VERSION }}

	- uses: actions/setup-python@v5
	name: Install Python
	with:
	python-version: '3.8'

	- name: Install OS dependencies
	if: steps.cache-c-core.outputs.cache-hit != 'true' \|\| steps.cache-c-deps.outputs.cache-hit != 'true' # Only needed when building the C core or libomp
	run:
	brew install ninja autoconf automake libtool cmake

	- name: Install OpenMP library
	if: steps.cache-c-deps.outputs.cache-hit != 'true'
	run: \|
	wget https://github.com/llvm/llvm-project/releases/download/llvmorg-$LLVM_VERSION/openmp-$LLVM_VERSION.src.tar.xz
	tar xf openmp-$LLVM_VERSION.src.tar.xz
	cd openmp-$LLVM_VERSION.src
	mkdir build && cd build
	cmake .. -DCMAKE_INSTALL_PREFIX=$HOME/local -DLIBOMP_ENABLE_SHARED=OFF -DCMAKE_OSX_ARCHITECTURES=${{ matrix.cmake_arch }}
	cmake --build .
	cmake --install .

	- name: Build wheels
	uses: pypa/[email protected]
	env:
	CIBW_ARCHS_MACOS: "${{ matrix.wheel_arch }}"
	CIBW_BEFORE_BUILD: "pip install -U setuptools && python setup.py build_c_core"
	CIBW_ENVIRONMENT: "LDFLAGS=-L$HOME/local/lib"
	# Skip tests for Python 3.13 because SciPy does not have wheels for Python 3.13 at all right now.
	CIBW_TEST_SKIP: "cp313-*"
	IGRAPH_CMAKE_EXTRA_ARGS: -DCMAKE_OSX_ARCHITECTURES=${{ matrix.cmake_arch }} ${{ matrix.cmake_extra_args }} -DCMAKE_PREFIX_PATH=$HOME/local

	- uses: actions/upload-artifact@v4
	with:
	name: wheels-macos-${{ matrix.wheel_arch }}
	path: ./wheelhouse/*.whl

	build_wheel_wasm:
	name: Build wheels for WebAssembly
	runs-on: ubuntu-20.04

	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	fetch-depth: 0

	- uses: actions/setup-python@v5
	name: Install Python
	with:
	python-version: '3.11.2'

	- name: Install OS dependencies
	run:
	sudo apt install ninja-build cmake flex bison

	- uses: mymindstorm/setup-emsdk@v14
	with:
	version: '3.1.45'
	actions-cache-folder: 'emsdk-cache'

	- name: Build wheel
	run: \|
	pip install pyodide-build==0.24.1
	python3 scripts/fix_pyodide_build.py
	pyodide build

	- name: Setup upterm session
	uses: lhotari/action-upterm@v1
	if: ${{ failure() }}
	with:
	limit-access-to-actor: true
	wait-timeout-minutes: 5

	- uses: actions/upload-artifact@v4
	with:
	name: wheels-wasm
	path: ./dist/*.whl

	build_wheel_win:
	name: Build wheels on Windows (${{ matrix.cmake_arch }})
	runs-on: windows-2019
	strategy:
	matrix:
	include:
	- cmake_arch: Win32
	wheel_arch: win32
	vcpkg_arch: x86
	- cmake_arch: x64
	wheel_arch: win_amd64
	vcpkg_arch: x64

	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	fetch-depth: 0

	- uses: actions/setup-python@v5
	name: Install Python
	with:
	python-version: '3.8'

	- name: Cache installed C core
	id: cache-c-core
	uses: actions/cache@v4
	with:
	path: vendor/install
	key: C-core-cache-${{ runner.os }}-${{ matrix.cmake_arch }}-${{ hashFiles('.git/modules/**/HEAD') }}

	- name: Cache VCPKG
	uses: actions/cache@v4
	with:
	path: C:/vcpkg/installed/
	key: vcpkg-${{ runner.os }}-${{ matrix.vcpkg_arch }}

	- name: Install build dependencies
	if: steps.cache-c-core.outputs.cache-hit != 'true' # Only needed when building the C core
	run: choco install winflexbison3 ninja

	- name: Install VCPKG libraries
	run: \|
	%VCPKG_INSTALLATION_ROOT%\vcpkg.exe integrate install
	%VCPKG_INSTALLATION_ROOT%\vcpkg.exe install libxml2:${{ matrix.vcpkg_arch }}-windows-static-md
	shell: cmd

	- name: Build wheels
	uses: pypa/[email protected]
	env:
	CIBW_BEFORE_BUILD: "pip install -U setuptools && python setup.py build_c_core"
	CIBW_BUILD: "*-${{ matrix.wheel_arch }}"
	CIBW_TEST_COMMAND: "cd /d {project} && pip install --prefer-binary \".[test]\" && python -m pytest tests"
	# Skip tests for Python 3.10 onwards because SciPy does not have
	# 32-bit wheels for Linux. Also skip tests for Python 3.13 because
	# SciPy does not have wheels for Python 3.13 at all right now.
	CIBW_TEST_SKIP: "cp310-win32 cp311-win32 cp312-win32 cp313-*"
	IGRAPH_CMAKE_EXTRA_ARGS: -DCMAKE_BUILD_TYPE=RelWithDebInfo -DVCPKG_TARGET_TRIPLET=${{ matrix.vcpkg_arch }}-windows-static-md -DCMAKE_TOOLCHAIN_FILE=c:/vcpkg/scripts/buildsystems/vcpkg.cmake -A ${{ matrix.cmake_arch }}
	IGRAPH_EXTRA_LIBRARY_PATH: C:/vcpkg/installed/${{ matrix.vcpkg_arch }}-windows-static-md/lib/
	IGRAPH_STATIC_EXTENSION: True
	IGRAPH_EXTRA_LIBRARIES: libxml2,lzma,zlib,iconv,charset
	IGRAPH_EXTRA_DYNAMIC_LIBRARIES: wsock32,ws2_32

	- uses: actions/upload-artifact@v4
	with:
	name: wheels-win-${{ matrix.wheel_arch }}
	path: ./wheelhouse/*.whl

	build_sdist:
	name: Build sdist and test extra dependencies
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	fetch-depth: 0

	- name: Cache installed C core
	id: cache-c-core
	uses: actions/cache@v4
	with:
	path: \|
	vendor/install
	key: C-core-cache-${{ runner.os }}-${{ hashFiles('.git/modules/**/HEAD') }}

	- name: Install OS dependencies
	if: steps.cache-c-core.outputs.cache-hit != 'true' # Only needed when building the C core
	run:
	sudo apt install ninja-build cmake flex bison

	- uses: actions/setup-python@v5
	name: Install Python
	with:
	python-version: '3.8'

	- name: Build sdist
	run: \|
	python setup.py build_c_core
	python setup.py sdist
	python setup.py install

	- name: Test
	run: \|
	pip install --prefer-binary cairocffi numpy scipy pandas networkx pytest pytest-timeout
	python -m pytest -v tests

	- uses: actions/upload-artifact@v4
	with:
	name: sdist
	path: dist/*.tar.gz

	# When updating 'runs-on', the ASan/UBSan library paths/versions must also be updated for LD_PRELOAD
	# for the "Test" step below.
	build_with_sanitizer:
	name: Build with sanitizers for debugging purposes
	runs-on: ubuntu-20.04
	env:
	IGRAPH_CMAKE_EXTRA_ARGS: -DFORCE_COLORED_OUTPUT=ON
	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	fetch-depth: 0

	- name: Cache installed C core
	id: cache-c-core
	uses: actions/cache@v4
	with:
	path: \|
	vendor/build
	vendor/install
	key: C-core-build-sanitizer-v1-${{ runner.os }}-${{ hashFiles('.git/modules/vendor/source/igraph/HEAD') }}

	- name: Install OS dependencies
	if: steps.cache-c-core.outputs.cache-hit != 'true' # Only needed when building the C core
	run:
	sudo apt install ninja-build cmake flex bison

	- uses: actions/setup-python@v5
	name: Install Python
	with:
	python-version: '3.12'

	- name: Install test dependencies
	run: \|
	pip install --prefer-binary pytest pytest-timeout setuptools

	- name: Build C core
	env:
	IGRAPH_USE_SANITIZERS: 1
	run: \|
	python setup.py build_c_core

	- name: Build and install Python extension
	env:
	IGRAPH_USE_SANITIZERS: 1
	run: \|
	# NOTE: install calls "build" first
	python setup.py install

	# Only pytest, and nothing else should be run in this section due to the presence of LD_PRELOAD.
	# The ASan/UBSan library versions need to be updated when switching to a newer Ubuntu/GCC.
	# LD_PRELOAD needs to be specified in the "run" section to ensure that we
	# do not pick up memory leaks in the wrapper shell (e.g., /bin/bash)
	- name: Test
	env:
	ASAN_OPTIONS: "detect_stack_use_after_return=1"
	LSAN_OPTIONS: "suppressions=etc/lsan-suppr.txt:print_suppressions=false"
	run: \|
	LD_PRELOAD=/lib/x86_64-linux-gnu/libasan.so.5:/lib/x86_64-linux-gnu/libubsan.so.1 python -m pytest --capture=sys tests

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build(deps): bump pypa/cibuildwheel from 2.19.2 to 2.20.0 #1636

Workflow file

build(deps): bump pypa/cibuildwheel from 2.19.2 to 2.20.0 #1636

Jobs

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Workflow file for this run