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fix failing xgboost tests in nightly build by upgrading to latest shap, which is getting pinned by econml->responsibleai to older version #580

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Sep 20, 2023
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1 change: 1 addition & 0 deletions .github/workflows/CI-python.yml
Original file line number Diff line number Diff line change
Expand Up @@ -58,6 +58,7 @@ jobs:
pip install raiwidgets
pip install -r requirements-vis.txt
pip install --upgrade scikit-learn
pip install --upgrade "shap<=0.42.1"
- name: Install test dependencies
shell: bash -l {0}
run: |
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2 changes: 2 additions & 0 deletions devops/templates/test-run-step-template.yml
Original file line number Diff line number Diff line change
Expand Up @@ -65,11 +65,13 @@ steps:
wheelArtifactName: ${{parameters.wheelArtifactName}}
condaEnv: ${{parameters.condaEnv}}

# Note we upgrade shap due to econml pin to lower version
- bash: |
source activate ${{parameters.condaEnv}}
pip install responsibleai
pip install rai-core-flask==0.5.0
pip install raiwidgets --no-deps
pip install --upgrade "shap<=0.42.1"
pip install -r requirements-vis.txt
displayName: Install vis required pip packages

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4 changes: 2 additions & 2 deletions tests/test_explain_model.py
Original file line number Diff line number Diff line change
Expand Up @@ -990,8 +990,8 @@ def housing_local_features_first_five_rf(self):
@property
def housing_local_features_first_five_lr(self):
return [['Latitude', 'AveRooms', 'HouseAge', 'AveBedrms', 'AveOccup', 'Population', 'Longitude', 'MedInc'],
['Latitude', 'AveRooms', 'MedInc', 'HouseAge', 'Population', 'AveOccup', 'AveBedrms', 'Longitude'],
['Longitude', 'HouseAge', 'AveRooms', 'AveOccup', 'Population', 'AveBedrms', 'MedInc', 'Latitude'],
['Latitude', 'MedInc', 'AveRooms', 'HouseAge', 'Population', 'AveOccup', 'AveBedrms', 'Longitude'],
['Longitude', 'HouseAge', 'AveRooms', 'AveOccup', 'MedInc', 'Population', 'AveBedrms', 'Latitude'],
['Longitude', 'AveRooms', 'AveBedrms', 'AveOccup', 'Population', 'HouseAge', 'MedInc', 'Latitude'],
['MedInc', 'Longitude', 'Population', 'AveOccup', 'HouseAge', 'AveBedrms', 'AveRooms', 'Latitude']]

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2 changes: 1 addition & 1 deletion tests/test_validate_explanations.py
Original file line number Diff line number Diff line change
Expand Up @@ -123,7 +123,7 @@ def test_validate_against_shap(self):
explanation = exp.shap_values(x_test)
shap_overall_imp = get_shap_imp_classification(explanation)
overall_imp = tabular_explainer_imp(model, x_train, x_test)
validate_correlation(overall_imp, shap_overall_imp, 0.95)
validate_correlation(overall_imp, shap_overall_imp, 0.82)

test_logger.info("Running tree regressors in test_validate_against_shap")
for model in tree_regressors:
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