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Merge branch 'master' of https://github.com/ipeaGIT/geobr
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rafapereirabr committed Nov 15, 2024
2 parents 189fcb6 + a4cf257 commit 2ba39b7
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14 changes: 7 additions & 7 deletions .github/workflows/Python-CMD-check.yaml
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Expand Up @@ -26,7 +26,7 @@ jobs:
fail-fast: false
matrix:
os: [ubuntu-latest, macOS-latest, windows-latest]
python-version: ["3.9", "3.10", "3.11"]
python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
# Python 3.8 support ends in 2024-10
# Python 3.12 support starts in 2023-10
# Check Python maintenance status at: https://www.python.org/downloads/
Expand All @@ -44,18 +44,18 @@ jobs:
python-version: ${{ matrix.python-version }}
cache: "pip"

- name: Install Poetry
- name: Install uv
run: |
python -m pip install --upgrade pip
pip install poetry
curl -LsSf https://astral.sh/uv/install.sh | sh
- name: Install dependencies with Poetry
run: poetry install
- name: Install dependencies with uv
run: uv sync
working-directory: python-package

- name: Run tests with Poetry
- name: Run tests with uv
run: |
poetry run pytest ./tests
uv run pytest -n auto ./tests
working-directory: python-package

- name: Upload check results
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4 changes: 2 additions & 2 deletions .github/workflows/R-CMD-check-CRAN.yaml
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Expand Up @@ -5,13 +5,13 @@ on:
paths:
- r-package/**
branches:
- main
- master
- dev
pull_request:
paths:
- r-package/**
branches:
- main
- master
- dev

name: R-CMD-check-as-CRAN
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1 change: 1 addition & 0 deletions .gitignore
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Expand Up @@ -52,3 +52,4 @@ python-package/.coverage
/r-package/.Rhistory
/r-package/.Rhistory
/r-package/.Rhistory
.pdm-build
1 change: 1 addition & 0 deletions README.md
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Expand Up @@ -172,6 +172,7 @@ As of today, there is another R package with similar functionalities: [simplefea
- Chile: [chilemapas](https://pacha.dev/chilemapas/)
- Czech Republic: [RCzechia](https://github.com/jlacko/RCzechia)
- Finland: [geofi](https://ropengov.github.io/geofi/)
- Kazakhstan: (geokz)[https://github.com/arodionoff/geokz]
- Peru: [mapsPERU](https://github.com/musajajorge/mapsPERU)
- Spain: [mapSpain](https://github.com/rOpenSpain/mapSpain/)
- UK: [geographr](https://github.com/britishredcrosssociety/geographr)
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7 changes: 3 additions & 4 deletions python-package/README.md
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Expand Up @@ -11,19 +11,18 @@
To start the development environment run

```sh
poetry install
uv sync
```

Test with

`poetry run pytest`
`uv run pytest -n auto`

You can use a helper to translate a function from R.
If you want to add `read_biomes`, just run

```sh
poetry shell
python helpers/translate_from_R.py read_biomes
uv run python helpers/translate_from_R.py read_biomes
```

It will scrape the original R function to get documentation and metadata.
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15 changes: 8 additions & 7 deletions python-package/geobr/utils.py
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@@ -1,6 +1,7 @@
import os
from functools import lru_cache
from urllib.error import HTTPError
import tempfile

import geopandas as gpd
import pandas as pd
Expand Down Expand Up @@ -171,21 +172,21 @@ def load_gpkg(url):
raise Exception(
"Some internal url is broken."
"Please report to https://github.com/ipeaGIT/geobr/issues"
)
) from e

# This below does not work in Windows -- see the Docs
# Whether the name can be used to open the file a second time, while the named temporary file is still open,
# varies across platforms (it can be so used on Unix; it cannot on Windows NT or later).
# https://docs.python.org/2/library/tempfile.html

# with tempfile.NamedTemporaryFile(suffix='.gpkg') as fp:
with open("temp.gpkg", "wb") as fp:

# Create a temporary file with .gpkg extension that is automatically deleted when closed
with tempfile.NamedTemporaryFile(suffix=".gpkg", delete=False) as fp:
fp.write(content)

# Need to close file before reading on Windows
fp.close()
gdf = gpd.read_file(fp.name)

os.remove("temp.gpkg")
# Clean up temp file
os.unlink(fp.name)

return gdf

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1,013 changes: 0 additions & 1,013 deletions python-package/poetry.lock

This file was deleted.

60 changes: 38 additions & 22 deletions python-package/pyproject.toml
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@@ -1,5 +1,23 @@
[tool.poetry]
authors = ["João Carabetta", "Rafael H. M. Pereira", "Caio Nogueira Goncalves", "Bernardo Furtado"]
[project]
name = "geobr"
version = "0.2.2"
description = "geobr: Download Official Spatial Data Sets of Brazil"
readme = "README.md"
requires-python = "<4.0,>=3.9"
license = {text = "MIT"}
authors = [
{name = "João Carabetta"},
{name = "Rafael H. M. Pereira"},
{name = "Caio Nogueira Goncalves"},
{name = "Bernardo Furtado"},
]
dependencies = [
"geopandas>=1.0.0,<=1.1",
"shapely>=1.7.0,<=2.1.0",
"requests<3.0.0,>=2.25.1",
"lxml<6.0.0,>=5.1.0",
"html5lib==1.1",
]
classifiers = [
"Intended Audience :: Science/Research",
"Intended Audience :: Developers",
Expand All @@ -8,29 +26,19 @@ classifiers = [
"Topic :: Scientific/Engineering :: Visualization",
"Programming Language :: Python",
]
description = "geobr: Download Official Spatial Data Sets of Brazil"

[project.urls]
homepage = "https://github.com/ipeaGIT/geobr"
license = "MIT"
name = "geobr"
packages = [
{include = "geobr"},
]
readme = "README.md"
repository = "https://github.com/ipeaGIT/geobr"
version = "0.2.1"

[tool.poetry.dependencies]
geopandas = "^0.14.0"
shapely = "^1.7.0"
python = "^3.9"
requests = "^2.25.1"
lxml = "^5.1.0"
html5lib = "1.1"
[build-system]
requires = ["pdm-backend"]
build-backend = "pdm.backend"

[tool.poetry.dev-dependencies]
pytest = "^6.0"
jinja2 = "^3.1.4"
fire = "^0.5.0"
[tool.pdm.build]
includes = [
"geobr",
]

[tool.black]
line-length = 88
Expand All @@ -53,4 +61,12 @@ exclude = '''
)/
| helpers/template
)
'''
'''

[tool.uv]
dev-dependencies = [
"pytest<7.0,>=6.0",
"pytest-xdist>=3.5.0",
"jinja2<4.0.0,>=3.1.4",
"fire<1.0.0,>=0.5.0",
]
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