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Issues list

Mismatch in load_csv in four batches in cpg0036-EU-OS-bioactives
#139 opened Nov 21, 2024 by migunasekera
Add additional ORF and CRISPR metadata
#137 opened Nov 18, 2024 by niranjchandrasekaran
Consider using Entrez Gene IDs (NCBI Gene) as the gene identifier
#135 opened Nov 11, 2024 by shntnu
Was any QC performed on raw images?
#133 opened Oct 28, 2024 by shntnu
1
Why are the poscon concentrations different across plate types? faq Document this issue in an FAQ
#132 opened Oct 28, 2024 by shntnu
1
Locating data obtained from channels associated with different cellular components
#119 opened Jul 12, 2024 by EmiliyaStol
2
Cells.csv column name information cpg0016
#118 opened Jul 12, 2024 by EmiliyaStol
1
ReadTimeoutError while downloading files with the b.fetch() command using Quilt’s Python client
#117 opened Jul 12, 2024 by EmiliyaStol
2
Converting Metadata_JCP2022 column information from the mad_int_featselect_harmony.parquet file into treatment names cpg0016
#116 opened Jul 12, 2024 by EmiliyaStol
1
Add Metadata_pert_type to CRISPR metadata
#113 opened Jun 12, 2024 by afermg
Update on deep learning embeddings cpg0016
#100 opened Feb 13, 2024 by goncinious
1
What are the actual controls for the CRISPR plates? cpg0016 faq Document this issue in an FAQ
#96 opened Jan 31, 2024 by timtreis
5
AGP channel looks strange/different in some sources cpg0016
#94 opened Jan 23, 2024 by shntnu
2
Weird batch effects in source_1 bug Something isn't working cpg0016
#89 opened Dec 19, 2023 by niranjchandrasekaran
Verify whether a plate in cpg0016/source_7 are rotated cpg0016
#87 opened Dec 8, 2023 by shntnu
Clarify why some compounds have multiple replicates cpg0016 faq Document this issue in an FAQ
#85 opened Dec 2, 2023 by ChenyuWang-Monica
@niranjchandrasekaran
2
Provide prefix sizes cpg0016
#81 opened Sep 7, 2023 by ErinWeisbart
2
Reinstate Brightfield channels in LoadData CSVs cpg0016
#79 opened Aug 21, 2023 by kenneth-gao
2
Provide information about missing files
#78 opened Aug 11, 2023 by hanslovsky
2
Report corrupt TIFF files, filter load_data where images are actually missing bug Something isn't working cpg0016
#76 opened Aug 10, 2023 by hanslovsky
9
Missing labels for some wells in COMPOUND_EMPTY plates in source_1
#75 opened Aug 8, 2023 by hanslovsky
2
Only .parquet files in profiles directory
#71 opened Jun 26, 2023 by lewismervin1
6
Data source in other cell lines good first issue Good for newcomers
#68 opened May 26, 2023 by ChenyuWang-Monica
6
Provide instructions for downloading images cpg0016 documentation Improvements or additions to documentation
#67 opened May 9, 2023 by shntnu
1
Error in illumination correction filenames for source_11 bug Something isn't working cpg0016
#66 opened May 9, 2023 by shntnu
ProTip! What’s not been updated in a month: updated:<2024-11-04.