Fixing deepcpgdna singularity container info

kipoi · Nov 12, 2021 · d253033 · d253033
1 parent 28748e1
commit d253033
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Showing 3 changed files with 6 additions and 6 deletions.
diff --git a/.circleci/config.yml b/.circleci/config.yml
@@ -203,8 +203,8 @@ workflows:
        - test_all_models_singularity:
            matrix:
              parameters:
-               num_of_shards: [4]
-               shard_id: [0, 1, 2, 3]
+               num_of_shards: [12]
+               shard_id: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11] #TODO: Switch back to 4
            filters:
              branches:
                only:

diff --git a/.circleci/setup.sh b/.circleci/setup.sh
@@ -47,7 +47,7 @@ echo "Installing Kipoi."
 # install kipoi and others from the master branch for now
 pip install git+https://github.com/kipoi/kipoi-utils.git
 pip install git+https://github.com/kipoi/kipoi-conda.git
-pip install git+https://github.com/kipoi/kipoi.git@add-singularity
+pip install git+https://github.com/kipoi/kipoi.git
 # pip install kipoi
 
 # fi

diff --git a/shared/containers/model-to-singularity.json b/shared/containers/model-to-singularity.json
@@ -1,8 +1,8 @@
 {
     "DeepCpG_DNA": {
-        "url": "https://zenodo.org/record/5644007/files/kipoi-docker_sharedpy3keras2.sif?download=1",
-        "name": "kipoi-docker_sharedpy3keras2",
-        "md5": "0e5354145f54c2c8c7efc3bb265aebac"
+        "url": "https://zenodo.org/record/5644005/files/kipoi-docker_sharedpy3keras1.2.sif?download=1",
+        "name": "kipoi-docker_sharedpy3keras1.2",
+        "md5": "cd748bae471b6af0b2cdaecca1e1c6ac"
     },
     "CpGenie": {
         "url": "https://zenodo.org/record/5644005/files/kipoi-docker_sharedpy3keras1.2.sif?download=1",