Code

Gridsearch nkg#127

Code

Merged

neukym merged 42 commits intomainkymata-atlas/kymata-core:mainfrom gridsearch-nkgkymata-atlas/kymata-core:gridsearch-nkgCopy head branch name to clipboardJan 27, 2024

+385-205

Commits

Commits on Jan 15, 2024

• Style

  caiw

  committed
  8071bf7

• Gridsearch saves nkg files and uses standard expression-plotting

  caiw

  committed
  77906f2

• Better error logging

  caiw

  committed
  8e311fc

• Clean up style

  caiw

  committed
  0340f30

• Try force getting names

  caiw

  committed
  025cfe1

• Unpair axes on sensor gridsearch

  caiw

  committed
  20e48be

• Optionally overwrite existing files

  caiw

  committed
  bbf013c

• Fixed a bug which caused eroneous FileExistErrors when saving figures

  caiw

  committed
  d76b735

• Review fix: Move default output location to 'output' dir

  caiw

  committed
  0dc42fb

• Review fix: move Ollie's paths out of argument defaults and into the .sh file

  caiw

  committed
  729c475

• More usual to have hyphens rather than underscores in cli args

  caiw

  committed
  887748e

• Review fix: add reality check plots back in

  caiw

  committed
  8ad3a1e

• sample invoker arguments in a script

  caiw

  committed
  8784099

• Save reality-check plots in output location

  caiw

  committed
  a4d58ca

• Bugfix

  caiw

  committed
  de0f5e0

• Review fix: create output dir if it doesn't already exist

  caiw

  committed
  2c2c85c

• Add inverse operator into invoker script

  caiw

  committed
  cc2eb95

• Progress bar code (currently unused)

  caiw

  committed
  679e561

• Comment update

  caiw

  committed
  9d08231

• Default sample data location needs to be created if it doesn't already exist

  caiw

  committed
  5f9636d

• Reorder lines for clarity

  caiw

  committed
  0bc50f9

• Move all plotting to plot.py (#130)

  Show description for 0218aec
  neukym

  authored
  0218aec

Commits on Jan 20, 2024

• Bug fix for gridsearch figure

  neukym

  committed
  5e0fa44

• Update plot.py

  neukym

  committed
  220fd5c

• Update mne.py

  neukym

  committed
  d23c778

• Update run_gridsearch.py

  neukym

  committed
  feac249

• Update mne.py

  neukym

  committed
  ea6d6ef

• Update mne.py

  neukym

  committed
  5e6b70c

Commits on Jan 21, 2024

• Fix hexel number bug

  neukym

  committed
  813d5e1

• Update run_gridsearch.py

  neukym

  committed
  1eabf8b

Commits on Jan 22, 2024

• add function name to begining of outputs

  neukym

  committed
  68262ed

• Got poetry to work with CBU slurm setup

  neukym

  committed
  991f2e1

• Adds 'time taken' to output

  neukym

  committed
  819ea81

Commits on Jan 24, 2024

• Minor changes

  neukym

  committed
  0ab9c75

• couple of super minor changes

  

  Oliver Parish

  committed
  087ec5f

• a couple more changes, added in inverse_operator_name

  

  Oliver Parish

  committed
  16064c7

Commits on Jan 26, 2024

• Removes "requirements" from invoker

  neukym

  committed
  d3d6dec

• Add s ability to do both hemipheres when inverse operator is selected

  neukym

  committed
  1229f89

• Remove comment from plain

  neukym

  committed
  67a23ec

• Remove hard-coded path to Andy's toolbox install

  caiw

  committed
  f71c148

Commits on Jan 27, 2024

• bugfix

  neukym

  committed
  dc0433d

• Update submit_gridsearch.sh

  neukym

  committed
  346a4d1