✨ PertCurator (#88)

* ✨ PertCurator * 📝 Guide * 💚 Cellxgene-lamin * 🎨 Deps * 💚 Nox * 🎨 Debug * 💚 Fix * 💚 Aws * 💚 Import * 💚 Fix import * 💚 Fix import * 🎨 Debug * 🎨 Debug * 💚 Fix circular import * 🎨 What's wrong? * ♻️ Prettify * 💚 Fix * 🚧 Debug * 💚 Attempt fix * 🚧 Debug * 🚧 Debug * ♻️ Refactor _pert_curator * ♻️ Hello I'm wetlab * ♻️ Nicer * ♻️ No longer need to install ourprojects * 💚 Fix pert-registries * ✏️ Try * 🎨 Revert * 🎨 Try again * ⏪️ Revert again * 💚 Fix * 💚 Fix * 💚 Try * 🐛 Hard error * 💚 Fix * 🎨 Raise import error --------- Co-authored-by: Alex Wolf <[email protected]>
laminlabs · Dec 20, 2024 · 14aba3a · 14aba3a
1 parent f422a2c
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diff --git a/.gitignore b/.gitignore
@@ -6,6 +6,8 @@ test.ipynb
 test-wetlab
 test-wetlab-2
 docs/guide/modeling-perturbations
+test-pert-curator/
+test-pert-registries/
 
 # macOS
 .DS_Store

diff --git a/docs/guide.md b/docs/guide.md
@@ -4,5 +4,6 @@
 :maxdepth: 1
 
 guide/get-started
-guide/modeling_perturbations
+guide/pert-registries
+guide/pert-curator
 ```
diff --git a/docs/guide/get-started.ipynb b/docs/guide/get-started.ipynb
diff --git a/docs/guide/get-started.md b/docs/guide/get-started.md
@@ -0,0 +1,15 @@
+# Get started
+
+Install all required dependencies:
+
+```bash
+pip install wetlab
+```
+
+Init your instance
+
+```bash
+lamin init --storage ./test-wetlab --schema bionty,wetlab
+```
+
+Everything else works exactly as for any other schema module and the core registries.