Add structure rxn rep #326
Workflow file for this run
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name: Python Package with caching | |
# taken from https://github.com/epassaro/cache-conda-envs | |
# cancel any previous running or pending jobs from the same branch | |
concurrency: | |
group: python-package-conda-cache-${{ github.head_ref }} | |
cancel-in-progress: true | |
on: | |
push: | |
branches: | |
- '*' | |
pull_request: | |
branches: | |
- '*' | |
schedule: | |
- cron: '0 0 * * 1' | |
workflow_dispatch: | |
env: | |
CACHE_NUMBER: 0 # increase to reset cache manually | |
jobs: | |
build: | |
strategy: | |
matrix: | |
include: | |
- os: ubuntu-latest | |
label: linux-64 | |
prefix: /usr/share/miniconda3/envs/my-env | |
name: ${{ matrix.label }} | |
runs-on: ${{ matrix.os }} | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Setup Mambaforge | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
miniforge-variant: Mambaforge | |
miniforge-version: latest | |
activate-environment: my-env | |
use-mamba: true | |
- name: Set cache date | |
run: echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV | |
- uses: actions/cache@v2 | |
with: | |
path: ${{ matrix.prefix }} | |
key: ${{ matrix.label }}-conda-${{ hashFiles('environment.yml') }}-${{ env.DATE }}-${{ env.CACHE_NUMBER }} | |
id: cache | |
- name: Update environment | |
run: mamba env update -n my-env -f environment.yml | |
if: steps.cache.outputs.cache-hit != 'true' | |
- name: Run tests | |
shell: bash -l {0} | |
run: pytest ./tests |