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cmungall committed Apr 11, 2024
1 parent 2e11448 commit aa1851f
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2 changes: 1 addition & 1 deletion .github/workflows/deploy_documentation.yml
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Expand Up @@ -7,7 +7,7 @@ on:
branches: [ main ]

paths:
- 'src/linkml_transformer/datamodel.yaml'
- 'src/linkml_map/datamodel.yaml'

# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
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2 changes: 1 addition & 1 deletion .github/workflows/main.yaml
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Expand Up @@ -86,7 +86,7 @@ jobs:
# run tests and generate coverage report
#----------------------------------------------
- name: Run tests
run: poetry run pytest --cov=src/linkml_transformer --cov-report=xml -rP tests/
run: poetry run pytest --cov=src/linkml_map --cov-report=xml -rP tests/

#----------------------------------------------
# upload coverage results
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4 changes: 2 additions & 2 deletions Makefile
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Expand Up @@ -45,12 +45,12 @@ all: gen-project gendoc
deploy: all mkd-gh-deploy

# TODO: make this default
src/linkml_transformer/datamodel/transformer_model.py: src/linkml_transformer/datamodel/transformer_model.yaml
src/linkml_map/datamodel/transformer_model.py: src/linkml_map/datamodel/transformer_model.yaml
$(RUN) gen-pydantic --pydantic-version 2 $< > $@.tmp && mv $@.tmp $@

# generates all project files
# TODO: combine pydantic into this step
gen-project: $(PYMODEL) src/linkml_transformer/datamodel/transformer_model.py
gen-project: $(PYMODEL) src/linkml_map/datamodel/transformer_model.py
$(RUN) gen-project -d $(DEST) $(SOURCE_SCHEMA_PATH)

test: test-python doctest
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4 changes: 2 additions & 2 deletions about.yaml
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@@ -1,3 +1,3 @@
name: linkml_transformer
name: linkml_map
description: Datamodel for schema transformations
source_schema_path: src/linkml_transformer/datamodel/transformer_model.yaml
source_schema_path: src/linkml_map/datamodel/transformer_model.yaml
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