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Issues: linkml/linkml

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#974 opened Sep 21, 2022 by sierra-moxon
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Issues list

run-examples fails on inlining as dictionary bug Something that should work but isn't, with an example and a test case. community-generated
#2425 opened Nov 22, 2024 by Silvanoc
1
1
run-examples fails on inlining as simple dictionary bug Something that should work but isn't, with an example and a test case. community-generated
#2423 opened Nov 22, 2024 by Silvanoc
2
imports does not respect local directory bug Something that should work but isn't, with an example and a test case. community-generated devops poetry, setuptools, actions, etc. related changes
#2422 opened Nov 21, 2024 by ialarmedalien
1
1
Could any MIxS LinkML concerns be addressed in DDD? NMDC
#2421 opened Nov 21, 2024 by turbomam
@turbomam
Tutorial 02 - Validation fails bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session
#2419 opened Nov 15, 2024 by emilianoreynares
@joga4er
1
SHACL annotations are skipped on slots/properties where any_of is used bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session generator-shacl
#2417 opened Nov 14, 2024 by elichad
run-examples fails on schema with exactly_one_of bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session
#2415 opened Nov 14, 2024 by Silvanoc
1
Adding support for abstract classes when using gen-sqlddl community-generated enhancement New feature or request generator-SQL
#2414 opened Nov 12, 2024 by VictoriaSavageNNL
Enable generation of comments on Oracle columns community-generated enhancement New feature or request
#2413 opened Nov 12, 2024 by VictoriaSavageNNL
3
Enable the generation of default column values in Oracle community-generated enhancement New feature or request
#2412 opened Nov 12, 2024 by VictoriaSavageNNL
3
missing keys for required, multivalued, annotations during linkml-map transformation for in slots bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session
#2411 opened Nov 11, 2024 by Duanoc
Ambiguous attributes should not be accepted ? bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session
#2403 opened Nov 8, 2024 by vincentkelleher
6
Need annotations to be carried forward to shacl using link-ml gen-shacl community-generated generator-shacl
#2402 opened Nov 8, 2024 by karanthpallavi
SHACL generation ignores all_of, none_of, and exactly_one_of bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session generator-shacl
#2400 opened Nov 7, 2024 by elichad
Code generated for schema with an attribute that is a type designator is wrong bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session generator-python
#2399 opened Nov 5, 2024 by Silvanoc
4
Memory leak when serializing ValidationReport instance or its results list as a whole bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session linkml-validate NMDC
#2395 opened Nov 4, 2024 by eecavanna
@pkalita-lbl
4
[tests] linkml_runtime has hardcoded models that are not regenerated during testing bug Something that should work but isn't, with an example and a test case. developer-days smallish tickets that can be considered "maintenance" and fixed within a single session linkml-runtime testing
#2387 opened Oct 28, 2024 by sneakers-the-rat
Deprecate linkml.validators and linkml.utils.validation bug Something that should work but isn't, with an example and a test case. developer-days smallish tickets that can be considered "maintenance" and fixed within a single session
#2384 opened Oct 28, 2024 by sneakers-the-rat
Serialization of PermissibleValue is wrong bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session generator-python linkml-convert linkml-validate
#2382 opened Oct 25, 2024 by Silvanoc
1
22
linkml-convert fails on schemas with ifabsent for enums bug Something that should work but isn't, with an example and a test case. community-generated developer-days smallish tickets that can be considered "maintenance" and fixed within a single session linkml-convert
#2380 opened Oct 25, 2024 by Silvanoc
1
Error in python 3.13 importing 're' from 'typing' package bug Something that should work but isn't, with an example and a test case. developer-days smallish tickets that can be considered "maintenance" and fixed within a single session
#2378 opened Oct 24, 2024 by HendrikBorgelt
5
[chore] SchemaBuilder is duplicated in linkml and linkml-runtime linkml-runtime
#2372 opened Oct 15, 2024 by sneakers-the-rat
1
[chore] Clean up and remove utils in linkml and linkml-runtime developer-days smallish tickets that can be considered "maintenance" and fixed within a single session linkml-runtime
#2371 opened Oct 15, 2024 by sneakers-the-rat
4
Importing linkml monkeypatches dataclass generation to allow arbitrary kwargs in __init__() bug Something that should work but isn't, with an example and a test case. developer-days smallish tickets that can be considered "maintenance" and fixed within a single session generator-dataclasses Python classes were generated by dataclass (we are mostly switching to Pydantic, though)
#2370 opened Oct 14, 2024 by sneakers-the-rat
1
Declare default imports in pydanticgen/pydanticgen.py community-generated generator-pydantic
#2367 opened Oct 11, 2024 by Silvanoc
1
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