Merge pull request #80 from thecaffiend/patch-1 #108

	name: coverage

	on: [push, pull_request]

	jobs:
	run:
	name: Coverage Test
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v3

	- uses: actions/setup-python@v4
	with:
	python-version: '3.10'

	- name: Install requirements
	run: \|
	pip install pyfaidx==0.5.8
	pip install pytest
	pip install gcovr

	- name: Generate coverage report
	run: \|
	python setup.py build_ext -i
	pytest tests
	gcovr --filter src/ --xml -o coverage.xml
	env:
	CFLAGS: --coverage

	- name: Upload Coverage to CodeCov
	uses: codecov/codecov-action@v3
	with:
	files: ./coverage.xml
	fail_ci_if_error: true

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