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Stop using MockApPipe.yaml in pipeline_driver tests.
MockApPipe.yaml let us run black-box tests of pipeline execution, but the pipeline was more prone to breakdowns than the pipeline driver itself. Replace MockApPipe.yaml with a traditional mock, even though it depends on implementation details of pipeline_driver.
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Original file line number | Diff line number | Diff line change |
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@@ -34,20 +34,14 @@ | |
from lsst.ap.verify import Dataset, WorkspaceGen3 | ||
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TESTDIR = os.path.abspath(os.path.dirname(__file__)) | ||
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def _getDataIds(butler): | ||
return list(butler.registry.queryDataIds({"instrument", "visit", "detector"}, datasets="raw")) | ||
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def patchApPipeGen3(method): | ||
"""Shortcut decorator for consistently patching AP code. | ||
""" | ||
@functools.wraps(method) | ||
def wrapper(self, *args, **kwargs): | ||
dbPatcher = unittest.mock.patch("lsst.ap.verify.pipeline_driver._makeApdb") | ||
patchedMethod = dbPatcher(method) | ||
pipePatcher = unittest.mock.patch("lsst.ap.verify.pipeline_driver.subprocess") | ||
patchedMethod = dbPatcher(pipePatcher(method)) | ||
return patchedMethod(self, *args, **kwargs) | ||
return wrapper | ||
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@@ -74,24 +68,7 @@ def setUp(self): | |
defineVisit = DefineVisitsTask(butler=self.workspace.workButler, | ||
config=DefineVisitsTask.ConfigClass()) | ||
defineVisit.run(self.workspace.workButler.registry.queryDataIds("exposure", datasets="raw")) | ||
ids = _getDataIds(self.workspace.workButler) | ||
self.apPipeArgs = pipeline_driver.ApPipeParser().parse_args( | ||
["--data-query", f"instrument = '{ids[0]['instrument']}' AND visit = {ids[0]['visit']}", | ||
"--pipeline", os.path.join(TESTDIR, "MockApPipe.yaml")]) | ||
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def testrunApPipeGen3Steps(self): | ||
"""Test that runApPipeGen3 runs the entire pipeline. | ||
""" | ||
pipeline_driver.runApPipeGen3(self.workspace, self.apPipeArgs) | ||
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# Use datasets as a proxy for pipeline completion | ||
id = _getDataIds(self.workspace.analysisButler)[0] | ||
self.assertTrue(self.workspace.analysisButler.exists("calexp", id)) | ||
self.assertTrue(self.workspace.analysisButler.exists("src", id)) | ||
self.assertTrue(self.workspace.analysisButler.exists("goodSeeingDiff_differenceExp", id)) | ||
self.assertTrue(self.workspace.analysisButler.exists("goodSeeingDiff_diaSrc", id)) | ||
self.assertTrue(self.workspace.analysisButler.exists("apdb_marker", id)) | ||
self.assertTrue(self.workspace.analysisButler.exists("goodSeeingDiff_assocDiaSrc", id)) | ||
self.apPipeArgs = pipeline_driver.ApPipeParser().parse_args(["--pipeline", "foo.yaml"]) | ||
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def _getArgs(self, call_args): | ||
if call_args.args: | ||
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@@ -102,7 +79,7 @@ def _getArgs(self, call_args): | |
self.fail(f"No APDB args passed to {call_args}!") | ||
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@patchApPipeGen3 | ||
def testrunApPipeGen3WorkspaceDb(self, mockDb): | ||
def testrunApPipeGen3WorkspaceDb(self, _mockPipe, mockDb): | ||
"""Test that runApPipeGen3 places a database in the workspace location by default. | ||
""" | ||
pipeline_driver.runApPipeGen3(self.workspace, self.apPipeArgs) | ||
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@@ -113,7 +90,7 @@ def testrunApPipeGen3WorkspaceDb(self, mockDb): | |
self.assertEqual(dbArgs["db_url"], "sqlite:///" + self.workspace.dbLocation) | ||
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@patchApPipeGen3 | ||
def testrunApPipeGen3WorkspaceCustom(self, mockDb): | ||
def testrunApPipeGen3WorkspaceCustom(self, _mockPipe, mockDb): | ||
"""Test that runApPipeGen3 places a database in the specified location. | ||
""" | ||
self.apPipeArgs.db = "postgresql://[email protected]/custom_db" | ||
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@@ -124,20 +101,14 @@ def testrunApPipeGen3WorkspaceCustom(self, mockDb): | |
self.assertIn("db_url", dbArgs) | ||
self.assertEqual(dbArgs["db_url"], self.apPipeArgs.db) | ||
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def testrunApPipeGen3Reuse(self): | ||
@patchApPipeGen3 | ||
def testrunApPipeGen3Reuse(self, mockPipe, _mockDb): | ||
"""Test that runApPipeGen3 does not run the pipeline at all (not even with | ||
--skip-existing) if --skip-pipeline is provided. | ||
""" | ||
skipArgs = pipeline_driver.ApPipeParser().parse_args(["--skip-pipeline"]) | ||
pipeline_driver.runApPipeGen3(self.workspace, skipArgs) | ||
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# Use datasets as a proxy for pipeline completion. | ||
# Depending on the overall test setup, the dataset may or may not be | ||
# registered if the pipeline didn't run; check both cases. | ||
id = _getDataIds(self.workspace.analysisButler)[0] | ||
calexpQuery = set(self.workspace.analysisButler.registry.queryDatasetTypes("calexp")) | ||
calexpExists = len(calexpQuery) > 0 | ||
self.assertFalse(calexpExists and self.workspace.analysisButler.exists("calexp", id)) | ||
mockPipe.assert_not_called() | ||
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class MemoryTester(lsst.utils.tests.MemoryTestCase): | ||
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