bring branch up to speed from last PR Merge branch 'master' into feat…

…/macs3/build_without_cython
macs3-project · Jan 10, 2024 · 2a27840 · 2a27840
2 parents 35d3042 + 3ab3b3a
commit 2a27840
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/MACS3/Commands/hmmratac_cmd.py b/MACS3/Commands/hmmratac_cmd.py
@@ -160,13 +160,13 @@ def run( args ):
         digested_atac_signals[ 0 ].write_bedGraph(fhd, "short","short")
         fhd.close()
         fhd = open(mono_bdgfile,"w")
-        digested_atac_signals[ 0 ].write_bedGraph(fhd, "mono","mono")
+        digested_atac_signals[ 1 ].write_bedGraph(fhd, "mono","mono")
         fhd.close()
         fhd = open(di_bdgfile,"w")
-        digested_atac_signals[ 0 ].write_bedGraph(fhd, "di","di")
+        digested_atac_signals[ 2 ].write_bedGraph(fhd, "di","di")
         fhd.close()
         fhd = open(tri_bdgfile,"w")
-        digested_atac_signals[ 0 ].write_bedGraph(fhd, "tri","tri")
+        digested_atac_signals[ 3 ].write_bedGraph(fhd, "tri","tri")
         fhd.close()        
 
     minlen = int(petrack.average_template_length)