Releases: maize-genetics/rPHG
Releases · maize-genetics/rPHG
v0.2.0
- Unified workflow for both local and server instances
- Added new class,
PHGServerCon
- New object for connecting to remote public PHG servers using BrAPI
endpoints
- New object for connecting to remote public PHG servers using BrAPI
- Added new class,
PHGLocalCon
- New object for connecting to local SQLite or PostgreSQL database
instances
- New object for connecting to local SQLite or PostgreSQL database
- Added new class,
HaplotypeGraph
- Wrapper for PHG API Java graph object
- Prior objects now use method dispatch for singular set of methods to return
relevant PHG data:PHGMethod()
showPHGMethods()
readSamples()
readRefRanges()
readHaplotypeIds()
readPHGDataSet()
- Updated summary methods:
numHaploPerRefRange()
calcMutualInfo()
plotGraph()
plotMutualInfo()