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Code for the Marley / Ardeco projects. Auto recognition of polyps states and import results in Biigle

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marinmarcillat/AutoPolyp

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To install the conda env, open anaconda prompt and run following command

conda create -n AutoPolyp  -c pytorch -c nvidia -c fastai -c anaconda -c conda-forge python=3.9 fastai jinja2 requests pandas tqdm opencv jupyterlab

To add support for gpu, check your cuda version with nvidia-smi command (cuda >= 11.6 required) and run following command

pip install torch==1.13.1+cu116 torchvision==0.14.1+cu116 torchaudio==0.13.1 --extra-index-url https://download.pytorch.org/whl/cu116

To launch, open anaconda prompt and run following commands

conda activate AutoPolyp 

cd /path/to/AutoPolyp  # Navigate to your Autopolyp directory, for example: cd D:\AutoPolyp
jupyter lab # Launch the jupyterlab interface

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Code for the Marley / Ardeco projects. Auto recognition of polyps states and import results in Biigle

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