0.9.0

Release notes for sbmlutils 0.9.0

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• bump pymetadata>=0.4.0 to switch to OLS4
• python 3.12 support (dropping python 3.9)
• pydantic fixes
• bugfixes
• updated sbml4humans
• libsbml-4.20.4
• improved ODE generation

Your sbmlutils team

0.8.7

Release notes for sbmlutils 0.8.7

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• bump python-libsbml>=5.20.2

Your sbmlutils team

0.8.6

Release notes for sbmlutils 0.8.6

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• fix #435, better unit support of sbml base units such as pascal or watt
• fix issue with registry: unexpected keyword argument 'deprecationOfflineDate'

Your sbmlutils team

0.8.5

Release notes for sbmlutils 0.8.5

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• fix #434, pydantic breaking changes
• minor fixes in type comparison
• bump pydantic version to >2.1 via pymetadata>=0.3.10

Your sbmlutils team

0.8.4

Release notes for sbmlutils 0.8.4

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• first version ODE report
• improvement: bump python-libsbml>=5.20.1
• updated development dependencies
• bugfix: logging flattening errors
• dropping python 3.8 support

Your sbmlutils team

0.8.3

Bump version: 0.8.2 → 0.8.3

0.8.2

Release notes for sbmlutils 0.8.2

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• first version ODE report
• improvement: bump python-libsbml>=5.20.1
• updated development dependencies
• bugfix: logging flattening errors
• dropping python 3.8 support

Your sbmlutils team

0.8.1

Release notes for sbmlutils 0.8.1

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• Fix #430, support for python 3.11

Your sbmlutils team

0.8.0

Release notes for sbmlutils 0.8.0

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• removed deprecated create_report
• Fix #409, support for AlgebraicRules
• Fix #333, full support of SBase information on rules: AssignmentRule, RateRule, AlgebraicRule.
• Fix #360, fixed CSS styling in SBML report
• Fix #414, better example for parameters and values in E-notation
• Fix #413, support for variable stoichiometries in reactions
• Fix #412, refactored equation handling
• removed deprecated write_model_to_sbml
• refactored validation options
• support for setting sid on InitialAssignment and Rules
• fixed issue with checking existing assignments and rules
• Fix #420, data structure for validation options. Support of general_consistency, identifier_consistency, mathml_consistency, units_consistency, sbo_consistency, overdetermined_model, modeling_practice
• Fix #418, simplified and clarified model creation options (backwards incompatibility!)
• Fix #422, improved handling of packages (backwards incompatibility!)
• Fix #411, support of antimony models
• Bump python-libsbml>=5.19.7, fixes for fbc support

Your sbmlutils team

0.7.6

Release notes for sbmlutils 0.7.6

We are pleased to release the next version of sbmlutils including the
following changes:

Features

• update pymetadata to 0.3.0
• update depinfo>=2.0.0
• update python-libsbml>=5.19.5, security fixes
• logging helpers

Your sbmlutils team