mbodied agents initial commit

.github/workflows/macos.yml

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+name: "MacOS | Python 3.12|3.11|3.10"
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+    branches: [main]
+  workflow_dispatch:
+
+permissions:
+  contents: read
+  pull-requests: write
+
+jobs:
+  test:
+    name: Python ${{ matrix.python-version }}
+    runs-on: macos-latest
+    strategy:
+      matrix:
+        python-version: ["3.12", "3.11", "3.10"]
+
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v3
+
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v3
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      - name: Run install script
+        run: |
+          chmod +x ./install.bash
+          ./install.bash
+
+      - name: Cache packages
+        uses: actions/cache@v3
+        env:
+          cache-name: cache-packages
+        with:
+          path: ~/Library/Caches/Homebrew
+          key: ${{ runner.os }}-${{ env.cache-name }}-${{ hashFiles('install.bash') }}
+          restore-keys: |
+            ${{ runner.os }}-${{ env.cache-name }}-
+      - name: Run tests
+        run: |
+          hatch run test

.github/workflows/ubuntu.yml

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+name: "Ubuntu"
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+    branches: [main]
+  workflow_dispatch:
+
+permissions:
+  contents: write
+  pull-requests: write
+
+jobs:
+  ubuntu:
+    name: ${{ matrix.os }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: [ubuntu-20.04, ubuntu-latest]
+
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v3
+
+      - name: Set up Python 3.11
+        uses: actions/setup-python@v3
+        with:
+          python-version: 3.11
+
+      - name: Run install script
+        run: |
+          chmod +x ./install.bash
+          ./install.bash
+
+      - name: Cache packages
+        uses: actions/cache@v3
+        env:
+          cache-name: cache-packages
+        with:
+          path: ~/.local/bin ~/.local/lib .mbodied/envs/mbodied
+          key: ${{ runner.os }}-${{ env.cache-name }}-${{ hashFiles('install.bash') }}
+          restore-keys: |
+            ${{ runner.os }}-${{ env.cache-name }}-
+
+      - name: Check disk usage
+        run: df -h
+
+      - name: Clean up before running tests
+        run: |
+          # Add commands to clean up unnecessary files
+          sudo apt-get clean
+          sudo rm -rf /usr/share/dotnet /etc/mysql /etc/php /etc/apt/sources.list.d
+          # Add more cleanup commands as needed
+
+      - name: Check disk usage after cleanup
+        run: df -h
+
+      - name: Run tests
+        run: |
+          hatch run test

.gitignore

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+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+/docs/generated
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/#use-with-ide
+.pdm.toml
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+.logfire
+.pytest*
+.*_cache
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+.idea/
+
+# Additionanl files
+*.hdf5
+*.ckpt
+*.jsonl
+images/
+*.zip
+dataset_cache/
+*frames
+*.mp4
+*.pt
+*.h5
+*.gpt_runner
+.DS_Store
+outputs/*
+**/*/outs/**/*
+outs/
+src/mbodied/outs
+.command_history*
+wandb/
+# Additional files
+*.hdf5outputs/
+.log
+.jpeg
+.jpg
+.tmp_listen*
+.tmp_speak*
+saved_datasets/

CONTRIBUTING.md

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+# Contributing
+
+## Development Practices
+
+### Git Workflow
+
+To ensure a clean and linear project history, we enforce specific Git practices:
+
+### Commit Messages
+
+- Always use gitlens (preferred), easycode, or write good commit messages.
+
+
+### Pulling Changes
+
+Always try to pull with `--ff-only` or `--rebase` when pulling changes from the `main` branch:
+
+```bash
+git pull --rebase
+```
+
+We recommend setting up your Git configuration as:
+
+```bash
+git config --global pull.ff only
+
+git config --global pull.rebase true
+
+```
+
+### Style Guide
+
+1. Lint with Ruff
+2. Place tests in a dedicated tests/ directory, with each test file named with a test_ prefix.
+3. Prefix all test function names with test_ to enable Pytest to automatically identify and execute them.
+4. Use Google-style docstrings to document all public classes, methods, functions, and modules.
+5. Include an example usage in the docstring for each important class, method, and function.
+6. Pydantic models should be tested for json serialization, deserialization, and saving to h5 files.