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  1. STRS STRS Public

    Suite of analysis tools for spatial total RNA-sequencing

    R 11 2

  2. scMuscle2 scMuscle2 Public

    Curation and analysis of skeletal muscle single-cell data across species

    Jupyter Notebook 2

  3. slide_snake slide_snake Public

    Snakemake workflow for the preprocessing, alignment, QC, and quantification of spatial transcriptomics data

    Jupyter Notebook 5 5

  4. scMuscle scMuscle Public

    The Cornell Single-Cell Muscle Project (scMuscle) aims to collect, analyze and provide to the research community skeletal muscle transcriptomic data

    HTML 19 4

  5. ref_snake ref_snake Public

    Snakemake workflow to automatically build and organize reference genomes for common alignment tasks

    JavaScript 2 1

  6. uTAR_lite uTAR_lite Public

    Lightweight version of the TAR-scRNA-seq pipeline, redesigned to be barebones and more flexible

    R 1