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Persist pared down all_docs collection in mongo #548

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PeopleMakeCulture opened this issue Jun 6, 2024 · 1 comment
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Persist pared down all_docs collection in mongo #548

PeopleMakeCulture opened this issue Jun 6, 2024 · 1 comment
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PeopleMakeCulture commented Jun 6, 2024 •
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Once a process to generate the all_docs collection has been formalized, we will want to materialize a collection in order to

  1. run validation and ref integrity checks
  2. potentially replace OverlayDB
  3. run graph queries (eg "for a given biosample, return all downstream data objects")

Depends on: #521
Related to: #401
@PeopleMakeCulture PeopleMakeCulture converted this from a draft issue Jun 6, 2024
@PeopleMakeCulture PeopleMakeCulture self-assigned this Jun 6, 2024
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duplicates #543

@github-project-automation github-project-automation bot moved this from On base to Scored in Polyneme mixset Jun 13, 2024
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