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109 Open 330 Closed
109 Open 330 Closed
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Issues list

Errors with GOLD ETL bug Something isn't working priority
#789 opened Nov 22, 2024 by aclum
@sujaypatil96
2
Explore migrating from pymongo to motor as an async python libary for mongodb enhancement New feature or request
#787 opened Nov 21, 2024 by mkshah605
@mkshah605
1
Deleting value from list with changesheets deletes all values bug Something isn't working
#785 opened Nov 20, 2024 by aclum
get off python-jose (switch to PyJWT) for more-likely upstream security patching enhancement New feature or request
#781 opened Nov 19, 2024 by dwinston
1
placeholder ticket for changes to MUTTS based on new L7 JGI metagenome metadata template enhancement New feature or request
#780 opened Nov 19, 2024 by aclum
2
Implement password reset flow for API users enhancement New feature or request
#778 opened Nov 15, 2024 by dwinston
2 tasks
1
4
navigating documentation was a bit difficult
#777 opened Nov 14, 2024 by mslarae13
2
migrate runtime status page to microbiomedata.org subdomain? decision needed tag issues that need to be unblocked by decisions enhancement New feature or request
#772 opened Nov 14, 2024 by dwinston
2
Cannot determine origin of Mongo index backlog Not assigned to a sprint or not completed during a planned sprint. Needs to be reprioritized. cleanup 🧹 Related to cleaning up code, documentation, etc. decision needed tag issues that need to be unblocked by decisions documentation Improvements or additions to documentation question Further information is requested
#769 opened Nov 13, 2024 by eecavanna
2 tasks
6
Add unit tests targeting alldocs-related operations (e.g. creation)
#765 opened Nov 12, 2024 by shreddd
1
Modify GOLD ETL code to check existing records and only create missing records. enhancement New feature or request priority
#756 opened Nov 7, 2024 by aclum
@sujaypatil96
2
[Parent] Make nmdc-runtime development environment setup easier
#755 opened Nov 7, 2024 by PeopleMakeCulture
@mkshah605 @PeopleMakeCulture
2
Update submission portal to mongo ETL to support specifying external data
#753 opened Nov 5, 2024 by aclum
@pkalita-lbl
Expose Auth Token to API user for CLI Client
#742 opened Oct 30, 2024 by PeopleMakeCulture
@dwinston @PeopleMakeCulture
8
Update /data_objects/study/{study_id} so it supports umbrella/parents studies as well enhancement New feature or request
#740 opened Oct 29, 2024 by sujaypatil96
@sujaypatil96
Longer lived access tokens enhancement New feature or request
#737 opened Oct 22, 2024 by shreddd
Core functionality of /data_objects/study/{study_id} endpoint is not being tested bug Something isn't working X SMALL Less than 1 day
#725 opened Oct 9, 2024 by eecavanna
Refactor /nmdcschema/associations endpoint
#717 opened Oct 4, 2024 by PeopleMakeCulture
@PeopleMakeCulture
4
Migrations: Move migration notebooks out of the demo directory cleanup 🧹 Related to cleaning up code, documentation, etc. X SMALL Less than 1 day
#712 opened Oct 2, 2024 by eecavanna
@eecavanna
submission portal to mongo ETL code creating records with empty keys bug Something isn't working
#711 opened Oct 1, 2024 by aclum
@pkalita-lbl
Document or delete top-level docs_prev directory cleanup 🧹 Related to cleaning up code, documentation, etc. documentation Improvements or additions to documentation X SMALL Less than 1 day
#710 opened Sep 29, 2024 by eecavanna
1 task
@dwinston
The alldocs collection can become stale relative to its upstream collections bug Something isn't working decision needed tag issues that need to be unblocked by decisions
#699 opened Sep 25, 2024 by eecavanna
berkeley: :param name: annotations for API endpoint are visible on Swagger UI backlog Not assigned to a sprint or not completed during a planned sprint. Needs to be reprioritized. berkeley-rollout-post-mvp-eligible does not block rolling out the MVP, still targeted for Oct cleanup 🧹 Related to cleaning up code, documentation, etc. documentation Improvements or additions to documentation X SMALL Less than 1 day
#698 opened Sep 21, 2024 by eecavanna
Dagster and referential integrity notebook generate alldocs collection in different ways
#696 opened Sep 20, 2024 by eecavanna
1
@PeopleMakeCulture
1
Cleanup: Move Swagger tag descriptions out of main.py and into helper file cleanup 🧹 Related to cleaning up code, documentation, etc. X SMALL Less than 1 day
#681 opened Sep 18, 2024 by eecavanna
ProTip! Adding no:label will show everything without a label.