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Add KEGG/GO Mappings #1470

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@naglepuff naglepuff commented Nov 26, 2024

Fix #1389

Changes

Backend

1. Update Postgres Models

Adds new model and table to track KEGG/GO mappings.

2. Update Ingest to Populate New Tables

Uses the data found here: https://www.genome.jp/kegg-bin/show?file=ko2go.xl, which has been downloaded as a file and added to NERSC.

3. Update Query Logic

Modify the SQLAlchemy used to translate a filter on GO terms to a filter on both KEGG and PFAM.

Note:

This builds on top of #1465 (note the base branch for this PR).

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