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1. cli_assistant cli_assistant Public

   Python based command line interface for prompted conversation using ChatGPT API

   Python 1

2. csbl/Jenior_RIPTiDe_2020 csbl/Jenior_RIPTiDe_2020 Public

   Repository associated with RIPTiDe publication

   Jupyter Notebook 1 2

3. SchlossLab/Jenior_Metatranscriptomics_mSphere_2018 SchlossLab/Jenior_Metatranscriptomics_mSphere_2018 Public

   Repository associated with Jenior ML, et al. (2018). mSphere.

   R 5 2

4. SchlossLab/Jenior_Modeling_mSystems_2017 SchlossLab/Jenior_Modeling_mSystems_2017 Public

   Repo associated with Jenior et. al. (2017). Clostridium difficile Colonizes Alternative Nutrient Niches during Infection across Distinct Murine Gut Microbiomes. mSystems.

   R 1 1

5. Smith_etal_Enterococcus Smith_etal_Enterococcus Public

   C. difficile metabolic modeling in co-culture with E. faecalis

   Jupyter Notebook 1

6. riptide riptide Public

   Reaction Inclusion by Parsimony and Transcript Distribution

   Python 11 3