new python file to upload mosaic-bert to hf

scripts/inference/convert_mosaicbert_to_hf.py

@@ -0,0 +1,287 @@
+# Copyright 2022 MosaicML LLM Foundry authors
+# SPDX-License-Identifier: Apache-2.0
+
+import os
+import tempfile
+from argparse import ArgumentParser, Namespace
+from pathlib import Path
+from typing import Optional, Tuple, Union
+import json
+import torch
+import transformers
+from composer.models.huggingface import get_hf_config_from_composer_state_dict
+from composer.utils import (get_file,
+                            parse_uri, safe_torch_load)
+from transformers import PretrainedConfig, PreTrainedTokenizerBase, AutoModelForMaskedLM
+import requests
+from llmfoundry.utils.huggingface_hub_utils import \
+    edit_files_for_hf_compatibility
+
+
+def download_file(url: str, file_name: Union[Path, str]):
+    response = requests.get(url)
+
+    if response.status_code == 200:
+        with open(file_name, 'wb') as file:
+            file.write(response.content)
+        print(f'File downloaded as {file_name}')
+    else:
+        print(f'Failed to download file. Status code: {response.status_code}')
+
+
+def write_huggingface_pretrained_from_composer_checkpoint(
+    checkpoint_path: Union[Path, str],
+    output_path: Union[Path, str],
+    trust_remote_code: bool,
+    output_precision: str = 'fp32',
+    local_checkpoint_save_location: Optional[Union[Path, str]] = None,
+    bert_config_path: Optional[str] = None,
+) -> Tuple[PretrainedConfig, Optional[PreTrainedTokenizerBase]]:
+    """Convert a Composer checkpoint to a pretrained HF checkpoint folder.
+
+    Write a ``config.json`` and ``pytorch_model.bin``, like
+    :meth:`transformers.PreTrainedModel.from_pretrained` expects, from a
+    composer checkpoint.
+
+    Args:
+        checkpoint_path (Union[Path, str]): Path to the composer checkpoint, can be a local path, or a remote path beginning with ``s3://``, or another backend
+            supported by :meth:`composer.utils.maybe_create_object_store_from_uri`.
+        output_path (Union[Path, str]): Path to the folder to write the output to.
+        trust_remote_code (bool): Whether or not to use code outside of the transformers module.
+        output_precision (str, optional): The precision of the output weights saved to `pytorch_model.bin`. Can be one of ``fp32``, ``fp16``, or ``bf16``.
+        local_checkpoint_save_location (Optional[Union[Path, str]], optional): If specified, where to save the checkpoint file to locally.
+                                                                                If the input ``checkpoint_path`` is already a local path, this will be a symlink.
+                                                                                Defaults to None, which will use a temporary file.
+        bert_config_path (Optional[str], optional): Path to the bert config file. Defaults to None. A placeholder config from mosaicml/mosaic-bert-base will be used if not provided.
+    """
+    dtype = {
+        'fp32': torch.float32,
+        'fp16': torch.float16,
+        'bf16': torch.bfloat16,
+    }[output_precision]
+
+    # default local path to a tempfile if path is not provided
+    if local_checkpoint_save_location is None:
+        tmp_dir = tempfile.TemporaryDirectory()
+        local_checkpoint_save_location = Path(
+            tmp_dir.name) / 'local-composer-checkpoint.pt'
+
+    # create folder
+    os.makedirs(output_path)
+
+    # download the checkpoint file
+    print(
+        f'Downloading checkpoint from {checkpoint_path} -> {local_checkpoint_save_location}'
+    )
+    get_file(str(checkpoint_path), str(local_checkpoint_save_location))
+
+    # Load the Composer checkpoint state dict
+    print('Loading checkpoint into CPU RAM...')
+    composer_state_dict = safe_torch_load(local_checkpoint_save_location)
+
+    if bert_config_path is not None:
+        #json
+        with open(bert_config_path, 'r') as f:
+            bert_config = json.load(f)   
+        composer_state_dict["state"]["integrations"] = {"huggingface":{"model":{"config":{"content": bert_config}}}}
+
+    else:
+        # placeholder config from mosaicml/mosaic-bert-base
+        composer_state_dict["state"]["integrations"]={"huggingface":{
+            "model":{"config":{"content":{
+                "_name_or_path": "mosaicml/mosaic-bert",
+                "alibi_starting_size": 512,
+                "architectures": [
+                    "BertForMaskedLM"
+                ],
+                "attention_probs_dropout_prob": 0.1,
+                "auto_map": {
+                    "AutoConfig": "configuration_bert.BertConfig",
+                    "AutoModelForMaskedLM": "bert_layers.BertForMaskedLM"
+                },
+                "classifier_dropout": None,
+                "gradient_checkpointing": False,
+                "hidden_act": "gelu",
+                "hidden_dropout_prob": 0.1,
+                "hidden_size": 768,
+                "initializer_range": 0.02,
+                "intermediate_size": 3072,
+                "layer_norm_eps": 1e-12,
+                "max_position_embeddings": 512,
+                "model_type": "bert",
+                "num_attention_heads": 12,
+                "num_hidden_layers": 12,
+                "pad_token_id": 0,
+                "position_embedding_type": "absolute",
+                "torch_dtype": "float32",
+                "transformers_version": "4.26.0",
+                "type_vocab_size": 2,
+                "use_cache": False,
+                "vocab_size": 30522
+
+        }}}},
+        "tokenizer":{}
+    }
+    if 'state' not in composer_state_dict:
+        raise RuntimeError(
+            f'"state" is not an available key in the provided composer checkpoint. Is {local_checkpoint_save_location} ill-formed?'
+        )
+
+    # Build and save HF Config
+    print('#' * 30)
+    print('Saving HF Model Config...')
+    hf_config = get_hf_config_from_composer_state_dict(composer_state_dict)
+    hf_config.torch_dtype = dtype
+    hf_config.save_pretrained(output_path)
+    print(hf_config)
+
+    # Extract the HF model weights
+    print('#' * 30)
+    print('Saving HF Model Weights...')
+    weights_state_dict = composer_state_dict
+    if 'state' in weights_state_dict:
+        weights_state_dict = weights_state_dict['state']['model']
+    torch.nn.modules.utils.consume_prefix_in_state_dict_if_present(
+        weights_state_dict, prefix='model.')
+
+    # Convert weights to desired dtype
+    for k, v in weights_state_dict.items():
+        if isinstance(v, torch.Tensor):
+            weights_state_dict[k] = v.to(dtype=dtype)
+
+    # Save weights
+    torch.save(weights_state_dict, Path(output_path) / 'pytorch_model.bin')
+
+    print('#' * 30)
+    print(f'HF checkpoint folder successfully created at {output_path}.')
+
+    return hf_config
+
+
+def parse_args() -> Namespace:
+    """Parse commandline arguments."""
+    parser = ArgumentParser(
+        description=
+        'Convert a HuggingFace causal LM in a Composer checkpoint into a standard HuggingFace checkpoint folder, and optionally upload to the hub.'
+    )
+    parser.add_argument('--composer_path', type=str, required=True)
+    parser.add_argument('--hf_output_path', type=str, required=True)
+
+    parser.add_argument('--bert_config_path', type=str)
+    parser.add_argument('--local_checkpoint_save_location',
+                        type=str,
+                        default=None)
+    parser.add_argument('--output_precision',
+                        type=str,
+                        choices=['fp32', 'fp16', 'bf16'],
+                        default='fp32')
+    parser.add_argument('--hf_repo_for_upload', type=str, default=None)
+    parser.add_argument('--test_uploaded_model', action='store_true')
+    parser.add_argument(
+        '--trust_remote_code',
+        action='store_true',
+        help='Whether or not to use code outside of transformers module.')
+
+    return parser.parse_args()
+
+
+def _convert_composer_to_hf(args: Namespace) -> None:
+    print()
+    print('#' * 30)
+    print('Converting Composer checkpoint to HuggingFace checkpoint format...')
+
+    _, _, local_folder_path = parse_uri(args.hf_output_path)
+
+    config = write_huggingface_pretrained_from_composer_checkpoint(
+        checkpoint_path=args.composer_path,
+        output_path=local_folder_path,
+        trust_remote_code=args.trust_remote_code,
+        output_precision=args.output_precision,
+        local_checkpoint_save_location=args.local_checkpoint_save_location,
+        bert_config_path=args.bert_config_path)
+
+
+    dtype = {
+        'fp32': torch.float32,
+        'fp16': torch.float16,
+        'bf16': torch.bfloat16,
+    }[args.output_precision]
+
+    print(f'Loading model from {local_folder_path}')
+
+    download_file("https://huggingface.co/mosaicml/mosaic-bert-base/raw/main/bert_layers.py", f"{local_folder_path}/bert_layers.py")
+    download_file("https://huggingface.co/mosaicml/mosaic-bert-base/raw/main/bert_padding.py", f"{local_folder_path}/bert_padding.py")
+    download_file("https://huggingface.co/mosaicml/mosaic-bert-base/raw/main/configuration_bert.py", f"{local_folder_path}/configuration_bert.py")
+    download_file("https://huggingface.co/mosaicml/mosaic-bert-base/raw/main/flash_attn_triton.py", f"{local_folder_path}/flash_attn_triton.py")
+
+
+    config = transformers.BertConfig.from_pretrained(local_folder_path)
+    loaded_hf_model = AutoModelForMaskedLM.from_pretrained(local_folder_path,config=config,trust_remote_code=True)
+
+
+    loaded_hf_model.save_pretrained(local_folder_path, safe_serialization=False)
+
+    # Only need to edit files for MPT because it has custom code
+    if config.model_type == 'mpt':
+        print('Editing files for HF compatibility...')
+        edit_files_for_hf_compatibility(local_folder_path)
+
+    if args.hf_repo_for_upload is not None:
+        from huggingface_hub import HfApi
+        api = HfApi()
+
+        print(
+            f'Uploading {args.hf_output_path} to HuggingFace Hub at {args.hf_repo_for_upload}'
+        )
+        api.create_repo(repo_id=args.hf_repo_for_upload,
+                        use_auth_token=True,
+                        repo_type='model',
+                        private=True,
+                        exist_ok=True)
+        print('Repo created.')
+
+        # ignore the full checkpoint file if we now have sharded checkpoint files
+        ignore_patterns = []
+        if any(
+                f.startswith('pytorch_model-00001')
+                for f in os.listdir(args.hf_output_path)):
+            ignore_patterns.append('pytorch_model.bin')
+
+        api.upload_folder(folder_path=args.hf_output_path,
+                          repo_id=args.hf_repo_for_upload,
+                          use_auth_token=True,
+                          repo_type='model',
+                          ignore_patterns=ignore_patterns)
+        print('Folder uploaded.')
+
+        if args.test_uploaded_model:
+            print('Testing uploaded model...')
+            hub_config = transformers.BertConfig.from_pretrained(args.hf_repo_for_upload)
+            hub_model = AutoModelForMaskedLM.from_pretrained(args.hf_repo_for_upload,config=hub_config,trust_remote_code=True)
+
+
+            assert sum(p.numel() for p in hub_model.parameters()) == sum(
+                p.numel() for p in loaded_hf_model.parameters())
+            assert all(
+                str(type(module1)).split('.')[-2:] == str(type(module2)).split(
+                    '.')[-2:] for module1, module2 in zip(
+                        hub_model.modules(), loaded_hf_model.modules()))
+
+            assert next(
+                hub_model.parameters()
+            ).dtype == dtype, f'Expected model dtype to be {dtype}, but got {next(hub_model.parameters()).dtype}'
+
+    print(
+        'Composer checkpoint successfully converted to HuggingFace checkpoint format.'
+    )
+
+
+def convert_composer_to_hf(args: Namespace) -> None:
+
+    try:
+        _convert_composer_to_hf(args)
+    except Exception as e:
+        raise e
+
+if __name__ == '__main__':
+    convert_composer_to_hf(parse_args())