Links:
canu: (this works normally not in this exercise becuse of the speed optimization)
minimap2:
https://github.com/lh3/minimap2
bioinformatic one liners (great resource):
https://github.com/stephenturner/oneliners
IGV:
https://software.broadinstitute.org/software/igv/
After the workshop all solutions and examples fo scritps will be posted here.