v3.2.0

Feature additions:

• Addition of modified base models for v5.0 basecalling models
  • All models (except for inosine) provided with SUP and HAC support
  • DNA
    • 5mC+5hmC, 5mC+4mC, 6mA
  • RNA (all models now all-contexts)
    • m6A, Pseudouridine, Inosine
• Add remora model inspect command
• Add remora dataset copy command
• Allow multiple models to be used with remora infer from_pod5_and_bam (support C-mod and A-mod calling simultaneously)
• Update learning rate scheduler to use cosine decay
• Support IUPAC revcomp
• Picoamp scaling enabled (model maintain use of scaling via k-mer levels)
• Allow signal padding for chunks at the end of a read
• Add parameter to limit the size of a dataset merge
• Allow training and validation from core or config dataset
• Reference-anchored inference documentation

Bug fixes:

• Extend access to missing_metrics_ok to allow more robust use of API for read loading
• Pin plotnine version
• Fix bug for chunk extraction over entire read
• Fix bug in m6A model specification