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ncihtan · Oct 19, 2023 · 1769ed9 · 1769ed9
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diff --git a/404.html b/404.html
@@ -3,7 +3,7 @@
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diff --git a/access_controlled/cds_access/index.html b/access_controlled/cds_access/index.html
@@ -3,15 +3,15 @@
 <head>
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     <!-- See retype.com -->
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     <!-- Primary Meta Tags -->
     <title>NCI&#39;s Cancer Data Service</title>
     <meta name="title" content="NCI's Cancer Data Service">
-    <meta name="description" content="The CDS Portal, within NCI's Cancer Research Data Commons (CRDC), provides an interface to filter and select data from a variety of NCI programs,...">
+    <meta name="description" content="NOTE: dbGaP approval for HTAN study phs002371 is required in order to access HTAN lower-level genomics data, such as RNAseq FASTQ and BAM files.">
 
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@@ -20,21 +20,21 @@
     <meta property="og:type" content="website">
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     <meta property="og:title" content="NCI's Cancer Data Service">
-    <meta property="og:description" content="The CDS Portal, within NCI's Cancer Research Data Commons (CRDC), provides an interface to filter and select data from a variety of NCI programs,...">
+    <meta property="og:description" content="NOTE: dbGaP approval for HTAN study phs002371 is required in order to access HTAN lower-level genomics data, such as RNAseq FASTQ and BAM files.">
 
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     <meta property="twitter:url" content="/access_controlled/cds_access/">
     <meta property="twitter:title" content="NCI's Cancer Data Service">
-    <meta property="twitter:description" content="The CDS Portal, within NCI's Cancer Research Data Commons (CRDC), provides an interface to filter and select data from a variety of NCI programs,...">
+    <meta property="twitter:description" content="NOTE: dbGaP approval for HTAN study phs002371 is required in order to access HTAN lower-level genomics data, such as RNAseq FASTQ and BAM files.">
 
     <script data-cfasync="false">(function () { var el = document.documentElement, m = localStorage.getItem("doc_theme"), wm = window.matchMedia; if (m === "dark" || (!m && wm && wm("(prefers-color-scheme: dark)").matches)) { el.classList.add("dark") } else { el.classList.remove("dark") } })();</script>
 
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@@ -169,6 +169,7 @@ <h1>
         <span>NCI&#x27;s Cancer Data Service</span>
     </h1>
 </doc-anchor-target>
+<p><strong>NOTE</strong>: dbGaP approval for HTAN study <a href="https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs002371.v3.p1">phs002371</a> is required in order to access HTAN lower-level genomics data, such as RNAseq FASTQ and BAM files.</p>
 <p>The <a href="https://dataservice.datacommons.cancer.gov/">CDS Portal</a>, within NCI&#x27;s Cancer Research Data Commons (CRDC), provides an interface to filter and select data from a variety of NCI programs, including controlled-access, primary sequence data from the Human Tumor Atlas Network (HTAN).</p>
 <p>In order to access these HTAN data within the <a href="https://dataservice.datacommons.cancer.gov/">CDS Portal</a>, navigate to the portal in a web browser and click on the <strong>Explore CDS Data</strong> button on the landing page.</p>
 <p align="center"><img width="364" alt="1" src="https://github.com/ncihtan/htan_missing_manual/assets/123744798/40aff1af-a58f-49dc-9253-6ee5e67ef419">
@@ -189,7 +190,7 @@ <h1>
 <p>Clicking on the cart icon, will bring up a list of the selected files.  Click on the <strong>Download Manifest</strong> button in the upper right to download a CSV-formated (Excel compatible) file of this file list.</p>
 <p align="center"><img width="891" alt="Figure 6" src="https://github.com/ncihtan/htan_missing_manual/assets/123744798/d3addd28-652d-4320-a109-d0080d1d37df"></p>
 <p> </p>
-<p>Once this file manifest is downloaded, it will have to be uploaded into your <a href="https://www.cancergenomicscloud.org/">Seven Bridges Cancer Genomics Cloud</a> account, in order for you to be able to download, or otherwise compute on, these data.  <strong>NOTE</strong>: dbGaP approval for HTAN study <a href="https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs002371.v3.p1">phs002371</a> is required in order to access HTAN lower-level genomics data, such as RNAseq FASTQ and BAM files.</p>
+<p>Once this file manifest is downloaded, it will have to be uploaded into your <a href="https://www.cancergenomicscloud.org/">Seven Bridges Cancer Genomics Cloud</a> account, in order for you to be able to download, or otherwise compute on, these data.</p>
 
 
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diff --git a/access_controlled/db_gap/index.html b/access_controlled/db_gap/index.html
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diff --git a/access_controlled/introduction/index.html b/access_controlled/introduction/index.html
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diff --git a/access_controlled/sb-cgc_access/index.html b/access_controlled/sb-cgc_access/index.html
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diff --git a/data_model/biospecimens/index.html b/data_model/biospecimens/index.html
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diff --git a/data_model/clinical/index.html b/data_model/clinical/index.html
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diff --git a/data_model/identifiers/index.html b/data_model/identifiers/index.html
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diff --git a/data_model/imaging/index.html b/data_model/imaging/index.html
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