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14 Open 0 Closed
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Issues list

How do I fix the problems in pytest when i try to install domainator_esmologs?
#15 opened Jun 19, 2024 by Xiewentao17
1
enhancements to matrix_report.py to be better for SSNs enhancement New feature or request
#13 opened Apr 22, 2024 by seanrjohnson
options for feature outlines in plot_contigs.py enhancement New feature or request
#12 opened Apr 21, 2024 by seanrjohnson
faster clustering of DNA sequences enhancement New feature or request
#11 opened Apr 21, 2024 by seanrjohnson
Rotate contigs app enhancement New feature or request
#10 opened Apr 21, 2024 by seanrjohnson
domain co-occurrence networks enhancement New feature or request
#9 opened Apr 21, 2024 by seanrjohnson
EFI-like Genome neighborhood networks enhancement New feature or request
#8 opened Apr 21, 2024 by seanrjohnson
Support for filtering by UniProt fragment enhancement New feature or request
#7 opened Apr 21, 2024 by seanrjohnson
support for annotating using nucleotide profiles (nhmmer, or infernal) enhancement New feature or request
#6 opened Apr 21, 2024 by seanrjohnson
sequence comparison in compare_contigs.py enhancement New feature or request
#5 opened Apr 21, 2024 by seanrjohnson
Test naming in extract_domains and select_by_cds tests
#4 opened Apr 21, 2024 by seanrjohnson
add options to pad on end or center of genes instead of on beginnings of genes enhancement New feature or request low-priority
#3 opened Apr 21, 2024 by seanrjohnson
Figure out why iter_data goes in a different order for sparse matrices than for the equivalent dense matrices. enhancement New feature or request
#2 opened Apr 21, 2024 by seanrjohnson
faster sequence file (GenBank) parsing enhancement New feature or request
#1 opened Apr 21, 2024 by seanrjohnson
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