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Merge PR bioconda#37080, commits were: 
 * Update meta.yaml
 * Update meta.yaml
 * Update meta.yaml
 * Merge branch 'master' into master
 * Merge branch 'master' into master
 * Merge pull request bioconda#8 from marcDabad/cvlr_package

new emas commit
 * new emas commit
 * Merge pull request bioconda#7 from marcDabad/cvlr_package

fix variable
 * fix variable
 * Merge branch 'master' into master
 * Merge pull request bioconda#6 from marcDabad/cvlr_package

gcc 2 cc
 * gcc 2 cc
 * Merge branch 'master' into master
 * Merge pull request bioconda#5 from marcDabad/cvlr_package

passes tests in local
 * passes tests in local
 * Merge branch 'master' into master
 * Merge pull request #4 from marcDabad/cvlr_package

cc
 * cc
 * Merge pull request #3 from marcDabad/cvlr_package

Cvlr package
 * Merge branch 'master' into master
 * Merge branch 'cvlr_package' of https://github.com/marcDabad/bioconda-recipes into cvlr_package
 * cvlr_recipe
 * Merge pull request #2 from marcDabad/cvlr_package

Cvlr package
 * Merge branch 'master' into cvlr_package
 * Merge pull request #1 from bioconda/master

update
 * cvlr_recipe
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marcDabad authored Oct 29, 2022
1 parent 6fbcd3c commit 3b91f4f
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8 changes: 8 additions & 0 deletions recipes/cvlr/build.sh
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export PREFIX=${PREFIX}
make GCC=$CC --file=makefile-conda.mk

cp cvlr-cluster ${PREFIX}/bin/.
cp cvlr-meth-of-bam ${PREFIX}/bin/.
cp *py ${PREFIX}/bin/.


42 changes: 42 additions & 0 deletions recipes/cvlr/meta.yaml
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{% set name = "cvlr" %}
{% set version = "1.0" %}

package:
name: "{{ name|lower }}"
version: "{{ version }}"

source:
url: https://github.com/EmanueleRaineri/cvlr/archive/292190acc1bc1d954810d00be9a0c1fabd6a3646.zip
sha256: eaceaa530925cc42aafdda32d9d6dfb73c26cb6eccc06615947545a6126fb46a
build:
number: 0

requirements:
build:
- make
- {{ compiler('c') }}
host:
- htslib
- libdeflate
- zlib
- curl
- xz
- openssl
- bzip2
run:
- python >=3
- numpy
- matplotlib-base

test:
commands:
- which cvlr-cluster
- which cvlr-meth-of-bam
- cvlr-stats.py -h

about:
home: https://github.com/EmanueleRaineri/releases/
license: MIT
license_family: MIT
summary: Clustering and Visualization of Long Reads

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