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Merge PR bioconda#34699, commits were: * Update meta.yaml * adding version information * not including build or ref patch * not updating dipcall * using python build * removing ref patch * changing to AE repo * Merge pull request #1 from bioconda/master updating with bioconda * adding bedtk depdendency to dipcall
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{% set version = "0.1.2018.08.10" %} | ||
{% set revision = "4b2b314" %} | ||
{% set hash = "3c41f1823f7a54a3c963261f492a012d90e31d94ff72251bfffac3bde886c0f1" %} | ||
{% set version = "3.2.0" %} | ||
{% set hash = "260abcebb202f524340dcae71947938f2b9852a09d8598bd288ff5f69c488ebf" %} | ||
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package: | ||
name: truvari | ||
version: {{ version }} | ||
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build: | ||
noarch: generic | ||
number: 2 | ||
number: 0 | ||
noarch: python | ||
script: python -m pip install --no-deps --ignore-installed . | ||
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source: | ||
url: https://github.com/spiralgenetics/truvari/archive/{{ revision }}.tar.gz | ||
url: https://files.pythonhosted.org/packages/04/79/5f8ba85e725c31b6a5ec3dcffcf3f5308f6c3de0cf0cf7814185a1edf47f/Truvari-3.2.0.tar.gz | ||
sha256: {{ hash }} | ||
patches: | ||
- no_ref.patch | ||
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requirements: | ||
host: | ||
- python >=3.6 | ||
- pip | ||
run: | ||
- python <3 | ||
- pyvcf | ||
- python-levenshtein | ||
- intervaltree | ||
- progressbar2 | ||
- pyfaidx | ||
- python >=3.6 | ||
- pytabix | ||
- bwapy | ||
- pandas | ||
- python-levenshtein ==0.12.2 | ||
- python-edlib >=1.3.8.post2 | ||
- progressbar2 >=3.41.0 | ||
- pysam >=0.15.2 | ||
- intervaltree >=3.0.2 | ||
- joblib >=1.0.1 | ||
- numpy >=1.21.2 | ||
- pytabix >=0.1 | ||
- bwapy >=0.1.4 | ||
- pandas >=1.3.3 | ||
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test: | ||
commands: | ||
- truvari --help | ||
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about: | ||
home: https://github.com/spiralgenetics/truvari | ||
home: https://github.com/ACEnglish/truvari | ||
license: MIT | ||
summary: 'Structural variant comparison tool for VCFs' |
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