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[ci skip] Merge PR 34699
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Merge PR bioconda#34699, commits were: 
 * Update meta.yaml
 * adding version information
 * not including build or ref patch
 * not updating dipcall
 * using python build
 * removing ref patch
 * changing to AE repo
 * Merge pull request #1 from bioconda/master

updating with bioconda
 * adding bedtk depdendency to dipcall
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nate-d-olson authored May 3, 2022
1 parent 390ad1b commit a221f7f
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10 changes: 0 additions & 10 deletions recipes/truvari/build.sh

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39 changes: 24 additions & 15 deletions recipes/truvari/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,35 +1,44 @@
{% set version = "0.1.2018.08.10" %}
{% set revision = "4b2b314" %}
{% set hash = "3c41f1823f7a54a3c963261f492a012d90e31d94ff72251bfffac3bde886c0f1" %}
{% set version = "3.2.0" %}
{% set hash = "260abcebb202f524340dcae71947938f2b9852a09d8598bd288ff5f69c488ebf" %}

package:
name: truvari
version: {{ version }}

build:
noarch: generic
number: 2
number: 0
noarch: python
script: python -m pip install --no-deps --ignore-installed .

source:
url: https://github.com/spiralgenetics/truvari/archive/{{ revision }}.tar.gz
url: https://files.pythonhosted.org/packages/04/79/5f8ba85e725c31b6a5ec3dcffcf3f5308f6c3de0cf0cf7814185a1edf47f/Truvari-3.2.0.tar.gz
sha256: {{ hash }}
patches:
- no_ref.patch

requirements:
host:
- python >=3.6
- pip
run:
- python <3
- pyvcf
- python-levenshtein
- intervaltree
- progressbar2
- pyfaidx
- python >=3.6
- pytabix
- bwapy
- pandas
- python-levenshtein ==0.12.2
- python-edlib >=1.3.8.post2
- progressbar2 >=3.41.0
- pysam >=0.15.2
- intervaltree >=3.0.2
- joblib >=1.0.1
- numpy >=1.21.2
- pytabix >=0.1
- bwapy >=0.1.4
- pandas >=1.3.3

test:
commands:
- truvari --help

about:
home: https://github.com/spiralgenetics/truvari
home: https://github.com/ACEnglish/truvari
license: MIT
summary: 'Structural variant comparison tool for VCFs'
39 changes: 0 additions & 39 deletions recipes/truvari/no_ref.patch

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