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fixup: dataset with root
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j23414 committed May 31, 2024
1 parent 5568c55 commit b61c18a
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Showing 2 changed files with 14 additions and 14 deletions.
26 changes: 13 additions & 13 deletions nextclade/datasets/all/genome_annotation.gff3
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##gff-version 3
##sequence-region NC_002640.1 1 10649
NC_002640.1 feature gene 102 440 . + . codon_start=1;gene=C;gene_name=C;
NC_002640.1 feature gene 441 713 . + . codon_start=1;gene=pr;gene_name=pr;
NC_002640.1 feature gene 441 938 . + . codon_start=1;gene=M;gene_name=M;
NC_002640.1 feature gene 939 2423 . + . codon_start=1;gene=E;gene_name=E;
NC_002640.1 feature gene 2424 3479 . + . codon_start=1;gene=NS1;gene_name=NS1;
NC_002640.1 feature gene 3480 4133 . + . codon_start=1;gene=NS2A;gene_name=NS2A;
NC_002640.1 feature gene 4134 4523 . + . codon_start=1;gene=NS2B;gene_name=NS2B;
NC_002640.1 feature gene 4524 6377 . + . codon_start=1;gene=NS3;gene_name=NS3;
NC_002640.1 feature gene 6378 6758 . + . codon_start=1;gene=NS4A;gene_name=NS4A;
NC_002640.1 feature gene 6759 6827 . + . codon_start=1;gene=2K;gene_name=2K;
NC_002640.1 feature gene 6828 7562 . + . codon_start=1;gene=NS4B;gene_name=NS4B;
NC_002640.1 feature gene 7563 10262 . + . codon_start=1;gene=NS5;gene_name=NS5;
##sequence-region Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome 1 10649
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 102 440 . + . codon_start=1;gene=C;gene_name=C;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 441 713 . + . codon_start=1;gene=pr;gene_name=pr;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 441 938 . + . codon_start=1;gene=M;gene_name=M;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 939 2423 . + . codon_start=1;gene=E;gene_name=E;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 2424 3479 . + . codon_start=1;gene=NS1;gene_name=NS1;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 3480 4133 . + . codon_start=1;gene=NS2A;gene_name=NS2A;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 4134 4523 . + . codon_start=1;gene=NS2B;gene_name=NS2B;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 4524 6377 . + . codon_start=1;gene=NS3;gene_name=NS3;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 6378 6758 . + . codon_start=1;gene=NS4A;gene_name=NS4A;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 6759 6827 . + . codon_start=1;gene=2K;gene_name=2K;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 6828 7562 . + . codon_start=1;gene=NS4B;gene_name=NS4B;
Reconstructed_root_sequence_of_https_nextstrain_org_dengue/all/genome feature gene 7563 10262 . + . codon_start=1;gene=NS5;gene_name=NS5;
2 changes: 1 addition & 1 deletion nextclade/datasets/all/tree.json

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