Code

Copy ingest#13

Code

Merged

j23414 merged 8 commits intomainnextstrain/dengue:mainfrom cp_ingestnextstrain/dengue:cp_ingestCopy head branch name to clipboardDec 5, 2023

+2,059

Commits

Commits on Nov 7, 2023

• Ingest: Copy ingest from mpox repo

  Show description for 11b67b1
  j23414

  committed
  11b67b1

• git subrepo clone (merge) https://github.com/nextstrain/ingest ingest/vendored

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  j23414

  committed
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• Ingest: Replace mpox text and taxon id with dengue

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  committed
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• Remove Nextclade related rules

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  committed
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• Remove unused reverse column

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• Clear pathogen specific user provided annotations and rules

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  committed
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Commits on Nov 8, 2023

• eradicate our confounding of release and submission

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  j23414

  and

  corneliusroemer

  committed
  94b0113

Commits on Dec 5, 2023

• NCBI Dataset field name transformations

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  j23414

  committed
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