rsv: update rsv datasets with more recent data and the B.D.E.1.1 clad…

…e designation
nextstrain · Nov 23, 2024 · daa27fd · daa27fd
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diff --git a/data/nextstrain/rsv/a/EPI_ISL_412866/CHANGELOG.md b/data/nextstrain/rsv/a/EPI_ISL_412866/CHANGELOG.md
@@ -1,3 +1,8 @@
+## Unreleased
+
+ - update reference tree with more recent data
+
+
 ## 2024-08-01T22:31:31Z
 
  - add subclades A.D.1.4-8

diff --git a/data/nextstrain/rsv/a/EPI_ISL_412866/README.md b/data/nextstrain/rsv/a/EPI_ISL_412866/README.md
@@ -10,7 +10,7 @@
 | clade definitions      | [github.com/rsv-lineages/lineage-designation-A](https://github.com/rsv-lineages/lineage-designation-A)              |
 
 ## Scope of this dataset
-This dataset for RSV-B uses reference sequence A/England/397/2017 with is available at under accession number EPI_ISL_412866 in GISAID. An almost identical sequence (slightly longer, 12 mutations, no gaps or indels) is available in NCBI as [LR699737](https://www.ncbi.nlm.nih.gov/nuccore/LR699737).
+This dataset for RSV-A uses reference sequence A/England/397/2017 with is available at under accession number EPI_ISL_412866 in GISAID. An almost identical sequence (slightly longer, 12 mutations, no gaps or indels) is available in NCBI as [LR699737](https://www.ncbi.nlm.nih.gov/nuccore/LR699737).
 This sequence has the duplication in the G-protein shared by all currently circulating variants.
 The reference tree covers the diversity of RSV-A since the first sequenced samples.
 

diff --git a/data/nextstrain/rsv/a/EPI_ISL_412866/sequences.fasta b/data/nextstrain/rsv/a/EPI_ISL_412866/sequences.fasta
diff --git a/data/nextstrain/rsv/a/EPI_ISL_412866/tree.json b/data/nextstrain/rsv/a/EPI_ISL_412866/tree.json
diff --git a/data/nextstrain/rsv/b/EPI_ISL_1653999/CHANGELOG.md b/data/nextstrain/rsv/b/EPI_ISL_1653999/CHANGELOG.md
@@ -1,3 +1,8 @@
+## Unreleased
+
+ - update reference tree with more recent data.
+ - include designation of B.D.E.1.1
+
 ## 2024-08-01T22:31:31Z
 
  - update of reference tree with additional data. No new clades.

diff --git a/data/nextstrain/rsv/b/EPI_ISL_1653999/sequences.fasta b/data/nextstrain/rsv/b/EPI_ISL_1653999/sequences.fasta
diff --git a/data/nextstrain/rsv/b/EPI_ISL_1653999/tree.json b/data/nextstrain/rsv/b/EPI_ISL_1653999/tree.json